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| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/DAPDC DAPDC] == | + | == Gene EF2901 == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| − | * common name:
| + | |
| − | ** Diaminopimelate decarboxylase
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * Reaction: [[PGCD]] |
| − | ** 1.0 [[h]][c] '''+''' 1.0 [[26dap__M]][c] '''=>''' 1.0 [[lys__L]][c] '''+''' 1.0 [[co2]][c]
| + | |
| − | * With common name(s):
| + | |
| − | ** 1.0 H+[c] '''+''' 1.0 Meso-2,6-Diaminoheptanedioate[c] '''=>''' 1.0 L-Lysine[c] '''+''' 1.0 CO2 CO2[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[EF1504]] | + | |
| − | ** [[pantograph]]-[[l_plantarum_wcfs1]]
| + | |
| − | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
| + | |
| − | == Pathways ==
| + | |
| − | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
| + | |
| − | ** '''460''' reactions found over '''2349''' reactions in the full pathway
| + | |
| − | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
| + | |
| − | ** '''179''' reactions found over '''1054''' reactions in the full pathway
| + | |
| − | * [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
| + | |
| − | ** '''13''' reactions found over '''34''' reactions in the full pathway
| + | |
| − | * [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
| + | |
| − | ** '''104''' reactions found over '''715''' reactions in the full pathway
| + | |
| − | * [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
| + | |
| − | ** '''56''' reactions found over '''228''' reactions in the full pathway
| + | |
| − | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
| + | |
| − | ** '''135''' reactions found over '''694''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| | ** Source: [[orthology-l_plantarum_wcfs1]] | | ** Source: [[orthology-l_plantarum_wcfs1]] |
| − | *** Tool: [[pantograph]] | + | == Pathways associated == |
| | + | * [[map01100]] |
| | + | * [[map01120]] |
| | + | * [[map01200]] |
| | + | * [[map01230]] |
| | + | * [[map00680]] |
| | + | * [[map00260]] |
| | + | * [[map01130]] |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: reaction associated=PGCD}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15101 15101]
| + | {{#set: pathway associated=map01100|map01120|map01200|map01230|map00680|map00260|map01130}} |
| − | * BioCyc : META:DIAMINOPIMDECARB-RXN
| + | |
| − | * MetaNetX (MNX) Equation : MNXR97141
| + | |
| − | * KEGG Reaction : R00451
| + | |
| − | * EC Number : 4.1.1.20
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=Diaminopimelate decarboxylase}}
| + | |
| − | {{#set: gene associated=EF1504}}
| + | |
| − | {{#set: in pathway=map01100|map01110|map00300|map01120|map01230|map01130}} | + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
