Difference between revisions of "NADH5"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD5 NTD5] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase (dTMP) * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NADH5 NADH5] == * direction: ** LEFT-TO-RIGHT * common name: ** NADH dehydrogenase (ubiquinone-8 )...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/NTD5 NTD5] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NADH5 NADH5] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** 5'-nucleotidase (dTMP)
+
** NADH dehydrogenase (ubiquinone-8 )
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h2o]][c] '''+''' 1.0 [[dtmp]][c] '''=>''' 1.0 [[thymd]][c] '''+''' 1.0 [[pi]][c]
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** 1.0 [[q8]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[q8h2]][c] '''+''' 1.0 [[nad]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H2O H2O[c] '''+''' 1.0 DTMP C10H13N2O8P[c] '''=>''' 1.0 Thymidine C10H14N2O5[c] '''+''' 1.0 Phosphate[c]
+
** 1.0 Ubiquinone-8[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Ubiquinol-8[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0822]]
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* Gene: [[EF3257]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
* [[EF0062]]
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* Gene: [[EF2055]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
** '''82''' reactions found over '''244''' reactions in the full pathway
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** Tool: [[pantograph]]
 
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11080 11080]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29107 29107]
* BioCyc : META:THYMIDYLATE-5-PHOSPHATASE-RXN
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* MetaNetX (MNX) Equation : MNXR101872
* MetaNetX (MNX) Equation : MNXR102035
+
* KEGG Reaction : R01569
+
* EC Number : 3.1.3.35
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=5'-nucleotidase (dTMP)}}
+
{{#set: common name=NADH dehydrogenase (ubiquinone-8 )}}
{{#set: gene associated=EF0822|EF0062}}
+
{{#set: gene associated=EF3257|EF2055}}
{{#set: in pathway=map00240|map01100}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:29, 21 March 2018

Reaction NADH5

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NADH dehydrogenase (ubiquinone-8 )
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Ubiquinone-8[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 H+[c] => 1.0 Ubiquinol-8[c] + 1.0 Nicotinamide adenine dinucleotide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR101872