Difference between revisions of "URIDK2r"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OIVD3 OIVD3] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-oxoisovalerate dehydrogenase (acy...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/URIDK2r URIDK2r] == * direction: ** REVERSIBLE * common name: ** Uridylate kinase (dUMP) * Synonym(...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/OIVD3 OIVD3] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/URIDK2r URIDK2r] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** 2-oxoisovalerate dehydrogenase (acylating; 3-methyl-2-oxopentanoate)
+
** Uridylate kinase (dUMP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[3mop]][c] '''+''' 1.0 [[coa]][c] '''+''' 1.0 [[nad]][c] '''=>''' 1.0 [[nadh]][c] '''+''' 1.0 [[co2]][c] '''+''' 1.0 [[2mbcoa]][c]
+
** 1.0 [[dump]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[adp]][c] '''+''' 1.0 [[dudp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 (S)-3-Methyl-2-oxopentanoate[c] '''+''' 1.0 Coenzyme A[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 CO2 CO2[c] '''+''' 1.0 2-Methylbutanoyl-CoA[c]
+
** 1.0 DUMP C9H11N2O8P[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 DUDP C9H11N2O11P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1661]]
+
* Gene: [[EF2396]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
* [[EF1659]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF1660]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF1658]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30907 30907]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30655 30655]
−
* MetaNetX (MNX) Equation : MNXR102174
+
* BioCyc : META:RXN-14122
−
* EC Number : 1.2.1
+
* MetaNetX (MNX) Equation : MNXR105160
−
* BioCyc : META:2KETO-3METHYLVALERATE-RXN
+
* KEGG Reaction : R02098
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* EC Number : 2.7.4.13
−
{{#set: common name=2-oxoisovalerate dehydrogenase (acylating; 3-methyl-2-oxopentanoate)}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: gene associated=EF1661|EF1659|EF1660|EF1658}}
+
{{#set: common name=Uridylate kinase (dUMP)}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=EF2396}}
 +
{{#set: in pathway=map00240|map01100}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:33, 21 March 2018

Reaction URIDK2r

  • direction:
    • REVERSIBLE
  • common name:
    • Uridylate kinase (dUMP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 DUMP C9H11N2O8P[c] + 1.0 ATP C10H12N5O13P3[c] <=> 1.0 ADP C10H12N5O10P2[c] + 1.0 DUDP C9H11N2O11P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN-14122
  • MetaNetX (MNX) Equation : MNXR105160
  • KEGG Reaction : R02098
  • EC Number : 2.7.4.13




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