Difference between revisions of "CRNDCAL2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SHSL1 SHSL1] == * direction: ** LEFT-TO-RIGHT * common name: ** O-succinylhomoserine lyase (L-cyste...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CRNDCAL2 CRNDCAL2] == * direction: ** LEFT-TO-RIGHT * common name: ** D-Carnitine-CoA Ligase * Syno...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/SHSL1 SHSL1] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CRNDCAL2 CRNDCAL2] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** O-succinylhomoserine lyase (L-cysteine)
+
** D-Carnitine-CoA Ligase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[suchms]][c] '''+''' 1.0 [[cys__L]][c] '''=>''' 1.0 [[succ]][c] '''+''' 1.0 [[cyst__L]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[crn__D]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[coa]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[crnDcoa]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 O-Succinyl-L-homoserine[c] '''+''' 1.0 L-Cysteine[c] '''=>''' 1.0 Succinate[c] '''+''' 1.0 L-Cystathionine[c] '''+''' 1.0 H+[c]
+
** 1.0 D-Carnitine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Coenzyme A[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 D-carnitinyl-CoA[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0290]]
+
* Gene: [[EF0446]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00450]]: [http://www.genome.jp/dbget-bin/www_bget?map00450 map00450]
 
−
** '''6''' reactions found over '''35''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map00920]]: [http://www.genome.jp/dbget-bin/www_bget?map00920 map00920]
 
−
** '''5''' reactions found over '''56''' reactions in the full pathway
 
−
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
 
−
** '''25''' reactions found over '''135''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''56''' reactions found over '''228''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''135''' reactions found over '''694''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20397 20397]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30543 30543]
−
* BioCyc : META:O-SUCCHOMOSERLYASE-RXN
+
* MetaNetX (MNX) Equation : MNXR96901
−
* MetaNetX (MNX) Equation : MNXR104380
+
−
* KEGG Reaction : R03260
+
−
* EC Number : 2.5.1.48
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=O-succinylhomoserine lyase (L-cysteine)}}
+
{{#set: common name=D-Carnitine-CoA Ligase}}
−
{{#set: gene associated=EF0290}}
+
{{#set: gene associated=EF0446}}
−
{{#set: in pathway=map01100|map00450|map01110|map00920|map00270|map01230|map01130}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:38, 21 March 2018

Reaction CRNDCAL2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • D-Carnitine-CoA Ligase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Carnitine[c] + 1.0 ATP C10H12N5O13P3[c] + 1.0 Coenzyme A[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 D-carnitinyl-CoA[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR96901




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