Difference between revisions of "DPMVD"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DMATT DMATT] == * direction: ** LEFT-TO-RIGHT * common name: ** Dimethylallyltranstransferase * Syn...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DPMVD DPMVD] == * direction: ** LEFT-TO-RIGHT * common name: ** Diphosphomevalonate decarboxylase *...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/DPMVD DPMVD] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Diphosphomevalonate decarboxylase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[atp]][c] '''+''' 1.0 [[5dpmev]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[co2]][c] '''+''' 1.0 [[ipdp]][c] '''+''' 1.0 [[pi]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 R 5 Diphosphomevalonate C6H10O10P2[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 CO2 CO2[c] '''+''' 1.0 Isopentenyl diphosphate[c] '''+''' 1.0 Phosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[EF0903]] |
| − | ** [[ | + | ** Source: [[orthology-l_plantarum_wcfs1]] |
| − | + | ||
| − | + | ||
== Pathways == | == Pathways == | ||
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| Line 30: | Line 28: | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
| − | |||
| − | |||
** Source: [[orthology-l_plantarum_wcfs1]] | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | |||
| − | |||
| − | |||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23732 23732] |
| − | * | + | * BioCyc : META:DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN |
| − | * KEGG Reaction : | + | * MetaNetX (MNX) Equation : MNXR97776 |
| + | * KEGG Reaction : R01121 | ||
| + | * EC Number : 4.1.1.33 | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Diphosphomevalonate decarboxylase}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=EF0903}} |
{{#set: in pathway=map01100|map01130|map01110|map00900}} | {{#set: in pathway=map01100|map01130|map01110|map00900}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=orthology-l_plantarum_wcfs1}} |
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:45, 21 March 2018
Contents
Reaction DPMVD
- direction:
- LEFT-TO-RIGHT
- common name:
- Diphosphomevalonate decarboxylase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 ATP C10H12N5O13P3[c] + 1.0 R 5 Diphosphomevalonate C6H10O10P2[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 CO2 CO2[c] + 1.0 Isopentenyl diphosphate[c] + 1.0 Phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF0903
- Source: orthology-l_plantarum_wcfs1
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map01130: map01130
- 135 reactions found over 694 reactions in the full pathway
- map01110: map01110
- 179 reactions found over 1054 reactions in the full pathway
- map00900: map00900
- 14 reactions found over 67 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
External links
- RHEA:
- BioCyc : META:DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN
- MetaNetX (MNX) Equation : MNXR97776
- KEGG Reaction : R01121
- EC Number : 4.1.1.33
