Difference between revisions of "EF2587"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OCBT OCBT] == * direction: ** REVERSIBLE * common name: ** Ornithine carbamoyltransferase * Synonym...")
 
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/nh4 nh4] == * common name: ** Ammonium * Synonym(s): == Reaction(s) known to consume the com...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/OCBT OCBT] ==
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/nh4 nh4] ==
* direction:
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** REVERSIBLE
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* common name:
 
* common name:
** Ornithine carbamoyltransferase
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** Ammonium
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[GLNS]]
** 1.0 [[orn]][c] '''+''' 1.0 [[cbp]][c] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[citr__L]][c] '''+''' 1.0 [[pi]][c]
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* [[NADS1]]
* With common name(s):
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* [[CTPS1]]
** 1.0 Ornithine[c] '''+''' 1.0 Carbamoyl phosphate[c] '''<=>''' 1.0 H+[c] '''+''' 1.0 L-Citrulline[c] '''+''' 1.0 Phosphate[c]
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== Reaction(s) known to produce the compound ==
 
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* [[CSND]]
== Genes associated with this reaction  ==
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* [[GUAD]]
Genes have been associated with this reaction based on different elements listed below.
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* [[DADA]]
* [[EF0105]]
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* [[ADA]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
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* [[NNAM]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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* [[GLUN]]
== Pathways  ==
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* [[DCYTD]]
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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* [[CYSTGL]]
** '''508''' reactions found over '''2349''' reactions in the full pathway
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* [[GLYO1]]
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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* [[DAPAL]]
** '''156''' reactions found over '''694''' reactions in the full pathway
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* [[CYTD]]
* [[map00220]]: [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220]
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* [[THRD_L]]
** '''12''' reactions found over '''65''' reactions in the full pathway
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* [[G6PDA]]
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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* [[3AMACHYD]]
** '''218''' reactions found over '''1054''' reactions in the full pathway
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* [[TRPAS1]]
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
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* [[ADD]]
** '''83''' reactions found over '''228''' reactions in the full pathway
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* [[ETHAAL]]
== Reconstruction information  ==
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* [[CYSTGL_1]]
* [[orthology]]:
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* [[GMPR]]
** [[pantograph]]:
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* [[PTRCOX1]]
*** [[e_coli_sstr_k12_substr_mg1655]]
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* [[ALLTAMH]]
*** [[l_plantarum_wcfs1]]
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* [[ASNN]]
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* [[SERD_D]]
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* [[ASPO1]]
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* [[CMPDAi]]
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* [[SERD_L]]
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* [[CYSTL]]
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== Reaction(s) of unknown directionality ==
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* [[GLUDy]]
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* [[MCSNAH]]
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* [[GLUDxi]]
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* [[NH4t]]
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* [[CBMKr]]
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* [[DCMPDA]]
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* [[GLYDHDA]]
 
== External links  ==
 
== External links  ==
* EC Number : 2.1.3.3
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{{#set: common name=Ammonium}}
* BioCyc : META:ORNCARBAMTRANSFER-RXN
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{{#set: consumed by=GLNS|NADS1|CTPS1}}
* MetaNetX (MNX) Equation : MNXR102137
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{{#set: produced by=CSND|GUAD|DADA|ADA|NNAM|GLUN|DCYTD|CYSTGL|GLYO1|DAPAL|CYTD|THRD_L|G6PDA|3AMACHYD|TRPAS1|ADD|ETHAAL|CYSTGL_1|GMPR|PTRCOX1|ALLTAMH|ASNN|SERD_D|ASPO1|CMPDAi|SERD_L|CYSTL}}
* RHEA:
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{{#set: consumed or produced by=GLUDy|MCSNAH|GLUDxi|NH4t|CBMKr|DCMPDA|GLYDHDA}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19513 19513]
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* Reactome : REACT_R-ATH-70560
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* KEGG Reaction : R01398
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Ornithine carbamoyltransferase}}
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{{#set: gene associated=EF0105}}
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{{#set: in pathway=map01100|map01130|map00220|map01110|map01230}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
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Revision as of 15:49, 10 January 2018

Metabolite nh4

  • common name:
    • Ammonium
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links