Difference between revisions of "EAR40x"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DHAD2 DHAD2] == * direction: ** LEFT-TO-RIGHT * common name: ** Dihydroxy-acid dehydratase (2,3-dih...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GNNUC GNNUC] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribosylpyrimidine nucleosidase * Sy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/DHAD2 DHAD2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GNNUC GNNUC] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate)
+
** Ribosylpyrimidine nucleosidase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[23dhmp]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[3mop]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[gsn]][c] '''=>''' 1.0 [[gua]][c] '''+''' 1.0 [[rib__D]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 (R)-2,3-Dihydroxy-3-methylpentanoate[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 (S)-3-Methyl-2-oxopentanoate[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 Guanosine[c] '''=>''' 1.0 Guanine[c] '''+''' 1.0 D-Ribose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF1921]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF2587]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
+
** '''82''' reactions found over '''244''' reactions in the full pathway
−
* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
+
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
−
** '''21''' reactions found over '''75''' reactions in the full pathway
+
** '''97''' reactions found over '''298''' reactions in the full pathway
−
* [[map00290]]: [http://www.genome.jp/dbget-bin/www_bget?map00290 map00290]
+
−
** '''17''' reactions found over '''49''' reactions in the full pathway
+
−
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
+
−
** '''25''' reactions found over '''80''' reactions in the full pathway
+
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
+
−
** '''83''' reactions found over '''228''' reactions in the full pathway
+
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
−
** '''156''' reactions found over '''694''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* [[orthology]]:
−
** [[meneco]]:
+
** [[pantograph]]:
−
*** [[added for gapfilling]]
+
*** [[l_plantarum_wcfs1]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27694 27694]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30771 30771]
−
* EC Number : 4.2.1.9
+
* BioCyc : META:RXN0-366
−
* MetaNetX (MNX) Equation : MNXR97359
+
* MetaNetX (MNX) Equation : MNXR100392
−
* KEGG Reaction : R05070
+
* KEGG Reaction : R01677
−
* BioCyc : META:DIHYDROXYMETVALDEHYDRAT-RXN
+
* EC Number : 3.2.2.1
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate)}}
+
{{#set: common name=Ribosylpyrimidine nucleosidase}}
−
{{#set: in pathway=map01100|map01110|map00770|map00290|map01210|map01230|map01130}}
+
{{#set: gene associated=EF1921|EF2587}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: in pathway=map01100|map00240|map00230}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=l_plantarum_wcfs1}}

Revision as of 15:52, 10 January 2018

Reaction GNNUC

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ribosylpyrimidine nucleosidase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 Guanosine[c] => 1.0 Guanine[c] + 1.0 D-Ribose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN0-366
  • MetaNetX (MNX) Equation : MNXR100392
  • KEGG Reaction : R01677
  • EC Number : 3.2.2.1




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