Difference between revisions of "EF3317"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALAALAD ALAALAD] == * direction: ** LEFT-TO-RIGHT * common name: ** D-alanine-D-alanine dipeptidase...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GDPDPK GDPDPK] == * direction: ** LEFT-TO-RIGHT * common name: ** GDP diphosphokinase * Synonym(s):...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALAALAD ALAALAD] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GDPDPK GDPDPK] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** D-alanine-D-alanine dipeptidase
+
** GDP diphosphokinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[alaala]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 2.0 [[ala__D]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[gdp]][c] '''=>''' 1.0 [[amp]][c] '''+''' 1.0 [[ppgpp]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 D-Alanyl-D-alanine[c] '''+''' 1.0 H2O H2O[c] '''=>''' 2.0 D-Alanine[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 GDP C10H12N5O11P2[c] '''=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 Guanosine 3',5'-bis(diphosphate)[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2293]]
+
* [[EF1974]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''97''' reactions found over '''298''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20661 20661]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28098 28098]
* BioCyc : META:3.4.13.22-RXN
+
* MetaNetX (MNX) Equation : MNXR100088
* MetaNetX (MNX) Equation : MNXR95675
+
* EC Number : 2.7.6.5
* KEGG Reaction : R07651
+
* BioCyc : META:GDPPYPHOSKIN-RXN
* EC Number : 3.4.13.22
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=D-alanine-D-alanine dipeptidase}}
+
{{#set: common name=GDP diphosphokinase}}
{{#set: gene associated=EF2293}}
+
{{#set: gene associated=EF1974}}
{{#set: in pathway=}}
+
{{#set: in pathway=map00230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}

Revision as of 16:55, 10 January 2018

Reaction GDPDPK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • GDP diphosphokinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 GDP C10H12N5O11P2[c] => 1.0 AMP C10H12N5O7P[c] + 1.0 Guanosine 3',5'-bis(diphosphate)[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR100088
  • EC Number : 2.7.6.5
  • BioCyc : META:GDPPYPHOSKIN-RXN