Difference between revisions of "Trnaleu"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FTHFLi FTHFLi] == * direction: ** LEFT-TO-RIGHT * common name: ** Formate-tetrahydrofolate ligase *...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CHLabc CHLabc] == * direction: ** LEFT-TO-RIGHT * common name: ** Choline transport via ABC system...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/FTHFLi FTHFLi] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CHLabc CHLabc] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Formate-tetrahydrofolate ligase
+
** Choline transport via ABC system
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[for]][c] '''+''' 1.0 [[thf]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[10fthf]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[chol]][e] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[chol]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Formate[c] '''+''' 1.0 5,6,7,8-Tetrahydrofolate[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 10-Formyltetrahydrofolate[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Choline C5H14NO[e] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 Choline C5H14NO[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1725]]
+
* [[EF0675]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF0862]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF0865]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF0864]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF0674]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF0863]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
−
** '''50''' reactions found over '''220''' reactions in the full pathway
 
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
 
−
** '''17''' reactions found over '''157''' reactions in the full pathway
 
−
* [[map00670]]: [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670]
 
−
** '''14''' reactions found over '''65''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''111''' reactions found over '''715''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[l_plantarum_wcfs1]]
 
*** [[l_plantarum_wcfs1]]
 +
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20221 20221]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=38715#1 38715#1]
−
* Reactome : REACT_R-ATH-5696839
+
* MetaNetX (MNX) Equation : MNXR96691
−
* MetaNetX (MNX) Equation : MNXR99672
+
−
* KEGG Reaction : R00943
+
−
* EC Number : 6.3.4.3
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Formate-tetrahydrofolate ligase}}
+
{{#set: common name=Choline transport via ABC system}}
−
{{#set: gene associated=EF1725}}
+
{{#set: gene associated=EF0675|EF0862|EF0865|EF0864|EF0674|EF0863}}
−
{{#set: in pathway=map01200|map01100|map00720|map00670|map01120}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=l_plantarum_wcfs1}}
+
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 15:59, 10 January 2018

Reaction CHLabc

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Choline transport via ABC system
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 Choline C5H14NO[e] + 1.0 H2O H2O[c] => 1.0 Phosphate[c] + 1.0 Choline C5H14NO[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR96691




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