Difference between revisions of "Lyx L"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ASP1DC ASP1DC] == * direction: ** LEFT-TO-RIGHT * common name: ** Aspartate 1-decarboxylase * Synon...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/Cut1 Cut1] == * direction: ** LEFT-TO-RIGHT * common name: ** Copper export via ATPase * Synonym(s)...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ASP1DC ASP1DC] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/Cut1 Cut1] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Aspartate 1-decarboxylase
+
** Copper export via ATPase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[asp__L]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[ala_B]][c] '''+''' 1.0 [[co2]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[cu2]][c] '''=>''' 1.0 [[cu2]][e] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 L-Aspartate[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Beta-Alanine[c] '''+''' 1.0 CO2 CO2[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Copper[c] '''=>''' 1.0 Copper[e] '''+''' 1.0 Phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1858]]
+
* [[EF0298]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
 
−
** '''21''' reactions found over '''75''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''111''' reactions found over '''715''' reactions in the full pathway
 
−
* [[map00650]]: [http://www.genome.jp/dbget-bin/www_bget?map00650 map00650]
 
−
** '''14''' reactions found over '''156''' reactions in the full pathway
 
−
* [[map00430]]: [http://www.genome.jp/dbget-bin/www_bget?map00430 map00430]
 
−
** '''5''' reactions found over '''24''' reactions in the full pathway
 
−
* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
 
−
** '''27''' reactions found over '''93''' reactions in the full pathway
 
−
* [[map00410]]: [http://www.genome.jp/dbget-bin/www_bget?map00410 map00410]
 
−
** '''8''' reactions found over '''91''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[e_coli_sstr_k12_substr_mg1655]]
 
−
*** [[l_plantarum_wcfs1]]
 
 
*** [[b_subtilis_subsp_subtilis_str168]]
 
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19497 19497]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10376#1 10376#1]
−
* BioCyc : META:ASPDECARBOX-RXN
+
* MetaNetX (MNX) Equation : MNXR96950
−
* MetaNetX (MNX) Equation : MNXR96077
+
* EC Number : 3.6.3
−
* KEGG Reaction : R00489
+
* BioCyc : META:3.6.3.4-RXN
−
* EC Number : 4.1.1.11
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Aspartate 1-decarboxylase}}
+
{{#set: common name=Copper export via ATPase}}
−
{{#set: gene associated=EF1858}}
+
{{#set: gene associated=EF0298}}
−
{{#set: in pathway=map01100|map01110|map00770|map01120|map00650|map00430|map00250|map00410}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}

Revision as of 16:01, 10 January 2018

Reaction Cut1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Copper export via ATPase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 ATP C10H12N5O13P3[c] + 1.0 Copper[c] => 1.0 Copper[e] + 1.0 Phosphate[c] + 1.0 H+[c] + 1.0 ADP C10H12N5O10P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR96950
  • EC Number : 3.6.3
  • BioCyc : META:3.6.3.4-RXN




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