Difference between revisions of "Frdp"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/pmtcoa pmtcoa] == * common name: ** Palmitoyl-CoA (n-C16:0CoA) * Synonym(s): == Reaction(s)...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CPPPGO CPPPGO] == * direction: ** LEFT-TO-RIGHT * common name: ** Coproporphyrinogen oxidase (O2 re...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/CPPPGO CPPPGO] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Coproporphyrinogen oxidase (O2 required) |
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | == | + | * With identifiers: |
| − | == | + | ** 1.0 [[o2]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[cpppg3]][c] '''=>''' 1.0 [[pppg9]][c] '''+''' 2.0 [[co2]][c] '''+''' 2.0 [[h2o]][c] |
| − | * [[ | + | * With common name(s): |
| + | ** 1.0 O2 O2[c] '''+''' 2.0 H+[c] '''+''' 1.0 Coproporphyrinogen III[c] '''=>''' 1.0 Protoporphyrinogen IX[c] '''+''' 2.0 CO2 CO2[c] '''+''' 2.0 H2O H2O[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * [[EF1305]] | ||
| + | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
| + | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''179''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map00860]]: [http://www.genome.jp/dbget-bin/www_bget?map00860 map00860] | ||
| + | ** '''4''' reactions found over '''106''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * [[orthology]]: | ||
| + | ** [[pantograph]]: | ||
| + | *** [[b_subtilis_subsp_subtilis_str168]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18257 18257] |
| + | * BioCyc : META:RXN0-1461 | ||
| + | * MetaNetX (MNX) Equation : MNXR96880 | ||
| + | * KEGG Reaction : R03220 | ||
| + | * EC Number : 1.3.3.3 | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Coproporphyrinogen oxidase (O2 required)}} | ||
| + | {{#set: gene associated=EF1305}} | ||
| + | {{#set: in pathway=map01100|map01110|map00860}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
| + | {{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}} | ||
Revision as of 16:06, 10 January 2018
Contents
Reaction CPPPGO
- direction:
- LEFT-TO-RIGHT
- common name:
- Coproporphyrinogen oxidase (O2 required)
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 O2 O2[c] + 2.0 H+[c] + 1.0 Coproporphyrinogen III[c] => 1.0 Protoporphyrinogen IX[c] + 2.0 CO2 CO2[c] + 2.0 H2O H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map01110: map01110
- 179 reactions found over 1054 reactions in the full pathway
- map00860: map00860
- 4 reactions found over 106 reactions in the full pathway
Reconstruction information
External links
- RHEA:
- BioCyc : META:RXN0-1461
- MetaNetX (MNX) Equation : MNXR96880
- KEGG Reaction : R03220
- EC Number : 1.3.3.3
