Difference between revisions of "PROTS LPL v60"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPM2 PPM2] == * direction: ** REVERSIBLE * common name: ** Phosphopentomutase 2 (deoxyribose) * Syn...")
 
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/trnaphe trnaphe] == * common name: ** TRNA(Phe) * Synonym(s): == Reaction(s) known to consum...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPM2 PPM2] ==
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/trnaphe trnaphe] ==
* direction:
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** REVERSIBLE
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* common name:
 
* common name:
** Phosphopentomutase 2 (deoxyribose)
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** TRNA(Phe)
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[PHETRS]]
** 1.0 [[2dr1p]][c] '''<=>''' 1.0 [[2dr5p]][c]
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== Reaction(s) known to produce the compound ==
* With common name(s):
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* [[PROTS_LPL_v60]]
** 1.0 2-Deoxy-D-ribose 1-phosphate[c] '''<=>''' 1.0 2-Deoxy-D-ribose 5-phosphate[c]
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== Reaction(s) of unknown directionality ==
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[EF0185]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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== Pathways  ==
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* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
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** '''26''' reactions found over '''69''' reactions in the full pathway
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* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
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** '''98''' reactions found over '''298''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[e_coli_sstr_k12_substr_mg1655]]
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*** [[b_subtilis_subsp_subtilis_str168]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common name=TRNA(Phe)}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25205 25205]
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{{#set: consumed by=PHETRS}}
* BioCyc : META:D-PPENTOMUT-RXN
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{{#set: produced by=PROTS_LPL_v60}}
* MetaNetX (MNX) Equation : MNXR103116
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* KEGG Reaction : R02749
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* EC Number : 5.4.2.7
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Phosphopentomutase 2 (deoxyribose)}}
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{{#set: gene associated=EF0185}}
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{{#set: in pathway=map00030|map00230}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|b_subtilis_subsp_subtilis_str168}}
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Revision as of 16:12, 10 January 2018

Metabolite trnaphe

  • common name:
    • TRNA(Phe)
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

  • PROTS_LPL_v60

Reaction(s) of unknown directionality

External links