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| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/SERD_L SERD_L] == | + | == Metabolite [http://bigg.ucsd.edu/universal/metabolites/sertrna sertrna] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** L-serine deaminase | + | ** L-Seryl-tRNA(Ser) |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | * [[PROTS_LPL_v60]] |
| − | ** 1.0 [[ser__L]][c] '''=>''' 1.0 [[pyr]][c] '''+''' 1.0 [[nh4]][c]
| + | == Reaction(s) known to produce the compound == |
| − | * With common name(s):
| + | * [[SERTRS]] |
| − | ** 1.0 L-Serine[c] '''=>''' 1.0 Pyruvate[c] '''+''' 1.0 Ammonium[c]
| + | == Reaction(s) of unknown directionality == |
| − | | + | |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[EF0098]] | + | |
| − | ** [[pantograph]]-[[l_plantarum_wcfs1]]
| + | |
| − | * [[EF2721]]
| + | |
| − | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
| + | |
| − | * [[EF2722]]
| + | |
| − | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | * [[EF0099]]
| + | |
| − | ** [[pantograph]]-[[l_plantarum_wcfs1]]
| + | |
| − | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
| + | |
| − | == Pathways == | + | |
| − | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | + | |
| − | ** '''508''' reactions found over '''2349''' reactions in the full pathway
| + | |
| − | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
| + | |
| − | ** '''156''' reactions found over '''694''' reactions in the full pathway
| + | |
| − | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
| + | |
| − | ** '''218''' reactions found over '''1054''' reactions in the full pathway
| + | |
| − | * [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
| + | |
| − | ** '''24''' reactions found over '''133''' reactions in the full pathway
| + | |
| − | * [[map00290]]: [http://www.genome.jp/dbget-bin/www_bget?map00290 map00290]
| + | |
| − | ** '''17''' reactions found over '''49''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[l_plantarum_wcfs1]]
| + | |
| − | *** [[b_subtilis_subsp_subtilis_str168]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: common name=L-Seryl-tRNA(Ser)}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19169 19169]
| + | {{#set: consumed by=PROTS_LPL_v60}} |
| − | * BioCyc : META:4.3.1.17-RXN
| + | {{#set: produced by=SERTRS}} |
| − | * MetaNetX (MNX) Equation : MNXR104339
| + | |
| − | * KEGG Reaction : R00220
| + | |
| − | * EC Number : 4.3.1.15
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=L-serine deaminase}} | + | |
| − | {{#set: gene associated=EF0098|EF2721|EF2722|EF0099}}
| + | |
| − | {{#set: in pathway=map01100|map01130|map01110|map00260|map00290}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}} | + | |
| − | {{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}} | + | |
