Difference between revisions of "MALTATr"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DCMPDA DCMPDA] == * direction: ** REVERSIBLE * common name: ** DCMP deaminase * Synonym(s): == Rea...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RAFH RAFH] == * direction: ** LEFT-TO-RIGHT * common name: ** Raffinose hydrolyzing enzyme * Synony...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/DCMPDA DCMPDA] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/RAFH RAFH] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** DCMP deaminase
+
** Raffinose hydrolyzing enzyme
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h2o]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[dcmp]][c] '''<=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[dump]][c]
+
** 1.0 [[raffin]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[fru]][c] '''+''' 1.0 [[melib]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H2O H2O[c] '''+''' 1.0 H+[c] '''+''' 1.0 DCMP C9H12N3O7P[c] '''<=>''' 1.0 Ammonium[c] '''+''' 1.0 DUMP C9H11N2O8P[c]
+
** 1.0 Raffinose C18H32O16[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 D-Fructose[c] '''+''' 1.0 Melibiose C12H22O11[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2448]]
+
* [[EF1603]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
+
* [[map00500]]: [http://www.genome.jp/dbget-bin/www_bget?map00500 map00500]
** '''83''' reactions found over '''244''' reactions in the full pathway
+
** '''15''' reactions found over '''81''' reactions in the full pathway
 +
* [[map00052]]: [http://www.genome.jp/dbget-bin/www_bget?map00052 map00052]
 +
** '''17''' reactions found over '''67''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
Line 27: Line 29:
 
*** [[b_subtilis_subsp_subtilis_str168]]
 
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
* EC Number : 3.5.4.12
+
* MetaNetX (MNX) Equation : MNXR103420
* BioCyc : META:DCMP-DEAMINASE-RXN
+
* KEGG Reaction : R02410
* MetaNetX (MNX) Equation : MNXR97185
+
* EC Number : 3.2.1.26
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22924 22924]
+
{{#set: common name=Raffinose hydrolyzing enzyme}}
* Reactome : REACT_R-ATH-73596
+
{{#set: gene associated=EF1603}}
* KEGG Reaction : R01663
+
{{#set: in pathway=map01100|map00500|map00052}}
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=DCMP deaminase}}
+
{{#set: gene associated=EF2448}}
+
{{#set: in pathway=map01100|map00240}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}

Revision as of 16:13, 10 January 2018

Reaction RAFH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Raffinose hydrolyzing enzyme
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Raffinose C18H32O16[c] + 1.0 H2O H2O[c] => 1.0 D-Fructose[c] + 1.0 Melibiose C12H22O11[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR103420
  • KEGG Reaction : R02410
  • EC Number : 3.2.1.26