Difference between revisions of "ExchangeSeed ile L"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP2 PUNP2] == * direction: ** REVERSIBLE * common name: ** Purine-nucleoside phosphorylase (Deoxy...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SEPHCHCS SEPHCHCS] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-succinyl-5-enolpyruvyl-6-hy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP2 PUNP2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/SEPHCHCS SEPHCHCS] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Purine-nucleoside phosphorylase (Deoxyadenosine)
+
** 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[dad_2]][c] '''+''' 1.0 [[pi]][c] '''<=>''' 1.0 [[2dr1p]][c] '''+''' 1.0 [[ade]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[ichor]][c] '''+''' 1.0 [[akg]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[2sephchc]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Deoxyadenosine[c] '''+''' 1.0 Phosphate[c] '''<=>''' 1.0 2-Deoxy-D-ribose 1-phosphate[c] '''+''' 1.0 Adenine[c]
+
** 1.0 H+[c] '''+''' 1.0 Isochorismate[c] '''+''' 1.0 2-Oxoglutarate[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0186]]
+
* [[EF0448]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF0187]]
+
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
+
* [[map00130]]: [http://www.genome.jp/dbget-bin/www_bget?map00130 map00130]
−
** '''83''' reactions found over '''244''' reactions in the full pathway
+
** '''9''' reactions found over '''40''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
+
** '''179''' reactions found over '''1054''' reactions in the full pathway
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
−
** '''98''' reactions found over '''298''' reactions in the full pathway
+
−
* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
+
−
** '''25''' reactions found over '''97''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[e_coli_sstr_k12_substr_mg1655]]
 
*** [[e_coli_sstr_k12_substr_mg1655]]
−
*** [[l_plantarum_wcfs1]]
 
−
*** [[b_subtilis_subsp_subtilis_str168]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27742 27742]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25593 25593]
−
* BioCyc : META:DEOXYADENPHOSPHOR-RXN
+
* MetaNetX (MNX) Equation : MNXR104329
−
* MetaNetX (MNX) Equation : MNXR103344
+
* KEGG Reaction : R08165
−
* KEGG Reaction : R02557
+
* EC Number : 2.2.1.9
−
* EC Number : 2.4.2.1
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase}}
−
{{#set: common name=Purine-nucleoside phosphorylase (Deoxyadenosine)}}
+
{{#set: gene associated=EF0448}}
−
{{#set: gene associated=EF0186|EF0187}}
+
{{#set: in pathway=map01100|map00130|map01110}}
−
{{#set: in pathway=map01100|map00240|map01110|map00230|map00760}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}

Revision as of 16:13, 10 January 2018

Reaction SEPHCHCS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 Isochorismate[c] + 1.0 2-Oxoglutarate[c] => 1.0 CO2 CO2[c] + 1.0 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR104329
  • KEGG Reaction : R08165
  • EC Number : 2.2.1.9




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