Difference between revisions of "TDMAT6 manual"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HEMAT2_manual HEMAT2_manual] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula ==...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYTB_B2 CYTB_B2] == * direction: ** LEFT-TO-RIGHT * common name: ** Menaquinol oxidase 71 protons...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/HEMAT2_manual HEMAT2_manual] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CYTB_B2 CYTB_B2] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Menaquinol oxidase  71 protons
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[nadh]][c] '''+''' 1.0 [[hx2coa]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[nad]][c] '''+''' 1.0 [[hexACP]][c]
+
** 1.0 [[mql7]][c] '''+''' 0.5 [[o2]][c] '''+''' 2.0 [[h]][c] '''=>''' 1.0 [[mqn7]][c] '''+''' 1.0 [[h2o]][c] '''+''' 2.0 [[h]][e]
 
* With common name(s):
 
* With common name(s):
** 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 Trans-Hex-2-enoyl-CoA[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Hexanoyl-ACP (n-C6:0ACP)[c]
+
** 1.0 Menaquinol 7 C46H66O2[c] '''+''' 0.5 O2 O2[c] '''+''' 2.0 H+[c] '''=>''' 1.0 Menaquinone 7 C46H64O2[c] '''+''' 1.0 H2O H2O[c] '''+''' 2.0 H+[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0282]]
+
* [[EF2058]]
** MANUAL
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** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF2059]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF2061]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF2060]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* [[orthology]]:
** [[manual curation]]
+
** [[pantograph]]:
 +
*** [[l_plantarum_wcfs1]]
 +
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
 +
* MetaNetX (MNX) Equation : MNXR97037
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: gene associated=EF0282}}
+
{{#set: common name=Menaquinol oxidase  71 protons }}
 +
{{#set: gene associated=EF2058|EF2059|EF2061|EF2060}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=manual curation}}
+
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 16:13, 10 January 2018

Reaction CYTB_B2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Menaquinol oxidase 71 protons
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Menaquinol 7 C46H66O2[c] + 0.5 O2 O2[c] + 2.0 H+[c] => 1.0 Menaquinone 7 C46H64O2[c] + 1.0 H2O H2O[c] + 2.0 H+[e]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR97037