Difference between revisions of "TPRDCOAS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ICL ICL] == * direction: ** LEFT-TO-RIGHT * common name: ** Isocitrate lyase * Synonym(s): == Reac...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALDD5 ALDD5] == * direction: ** LEFT-TO-RIGHT * common name: ** Aldehyde dehydrogenase pentanal N...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ICL ICL] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALDD5 ALDD5] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Isocitrate lyase
+
** Aldehyde dehydrogenase  pentanal  NAD
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[icit]][c] '''=>''' 1.0 [[succ]][c] '''+''' 1.0 [[glx]][c]
+
** 1.0 [[ptal]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[nad]][c] '''=>''' 1.0 [[pta]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[nadh]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Isocitrate[c] '''=>''' 1.0 Succinate[c] '''+''' 1.0 Glyoxylate[c]
+
** 1.0 Pentanal[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''=>''' 1.0 Pentanoate[c] '''+''' 2.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF0253]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
** '''50''' reactions found over '''220''' reactions in the full pathway
 
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
 
** '''25''' reactions found over '''129''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''218''' reactions found over '''1054''' reactions in the full pathway
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
** '''111''' reactions found over '''715''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[gap-filling]]:
+
* [[orthology]]:
** [[meneco]]:
+
** [[pantograph]]:
*** [[added for gapfilling]]
+
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR95757
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13245 13245]
+
* MetaNetX (MNX) Equation : MNXR100789
+
* KEGG Reaction : R00479
+
* EC Number : 4.1.3.1
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Isocitrate lyase}}
+
{{#set: common name=Aldehyde dehydrogenase  pentanal  NAD }}
{{#set: in pathway=map01200|map00630|map01110|map01100|map01120}}
+
{{#set: gene associated=EF0253}}
{{#set: reconstruction category=gap-filling}}
+
{{#set: in pathway=}}
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}

Revision as of 16:15, 10 January 2018

Reaction ALDD5

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Aldehyde dehydrogenase pentanal NAD
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Pentanal[c] + 1.0 H2O H2O[c] + 1.0 Nicotinamide adenine dinucleotide[c] => 1.0 Pentanoate[c] + 2.0 H+[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR95757