Difference between revisions of "E4p"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PANTS PANTS] == * direction: ** LEFT-TO-RIGHT * common name: ** Pantothenate synthase * Synonym(s):...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00500 map00500] == * common_name: ** Starch and sucrose metabolism * Synonym(s): == Reaction(s) fo...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/PANTS PANTS] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00500 map00500] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Starch and sucrose metabolism
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* common name:
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** Pantothenate synthase
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''15''' reactions found over '''81''' reactions in the full pathway
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** 1.0 [[atp]][c] '''+''' 1.0 [[ala_B]][c] '''+''' 1.0 [[pant__R]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[amp]][c] '''+''' 1.0 [[pnto__R]][c]
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* [[AB6PGH]]
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* With common name(s):
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** 2 associated gene(s):
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** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Beta-Alanine[c] '''+''' 1.0 (R)-Pantoate[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 (R)-Pantothenate[c]
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*** [[EF1411]]
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*** [[EF0291]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[EF1859]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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* [[FFSD]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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** 1 associated gene(s):
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== Pathways  ==
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*** [[EF1603]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** 2 reconstruction source(s) associated:
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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*** [[orthology-l_plantarum_wcfs1]]
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** '''179''' reactions found over '''1054''' reactions in the full pathway
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* [[G6PI]]
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* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
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** 1 associated gene(s):
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** '''17''' reactions found over '''75''' reactions in the full pathway
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*** [[EF1416]]
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* [[map00410]]: [http://www.genome.jp/dbget-bin/www_bget?map00410 map00410]
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** 2 reconstruction source(s) associated:
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** '''8''' reactions found over '''91''' reactions in the full pathway
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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== Reconstruction information  ==
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*** [[orthology-l_plantarum_wcfs1]]
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* [[orthology]]:
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* [[GALUi]]
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** [[pantograph]]:
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** 1 associated gene(s):
−
*** [[e_coli_sstr_k12_substr_mg1655]]
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*** [[EF1746]]
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*** [[b_subtilis_subsp_subtilis_str168]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[GDPMNP]]
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** 1 associated gene(s):
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*** [[EF2696]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[HEX1]]
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** 1 associated gene(s):
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*** [[EF2788]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[HEX7]]
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** 4 associated gene(s):
 +
*** [[EF0840]]
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*** [[EF0424]]
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*** [[EF2265]]
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*** [[EF1179]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[MLTG1]]
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** 2 associated gene(s):
 +
*** [[EF1347]]
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*** [[EF1348]]
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** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[MLTG3]]
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** 2 associated gene(s):
 +
*** [[EF1347]]
 +
*** [[EF1348]]
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** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[NADDP]]
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** 1 associated gene(s):
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*** [[EF0722]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[PGI]]
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** 1 associated gene(s):
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*** [[EF1416]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[PGMT]]
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** 3 associated gene(s):
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*** [[EF0369]]
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*** [[EF0677]]
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*** [[EF2425]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[RAFH]]
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** 1 associated gene(s):
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*** [[EF1603]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[SUCR]]
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** 2 associated gene(s):
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*** [[EF1602]]
 +
*** [[EF1348]]
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** 2 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
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* [[TRE6PH]]
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** 1 associated gene(s):
 +
*** [[EF1348]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/6PHBG 6PHBG]
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* [http://bigg.ucsd.edu/universal/reactions/AATHA AATHA]
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* [http://bigg.ucsd.edu/universal/reactions/AATHB AATHB]
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* [http://bigg.ucsd.edu/universal/reactions/ABFPT ABFPT]
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* [http://bigg.ucsd.edu/universal/reactions/ABFPTh ABFPTh]
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* [http://bigg.ucsd.edu/universal/reactions/ADPGLC ADPGLC]
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* [http://bigg.ucsd.edu/universal/reactions/ADPMAN ADPMAN]
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* [http://bigg.ucsd.edu/universal/reactions/AMALT1 AMALT1]
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* [http://bigg.ucsd.edu/universal/reactions/AMALT2 AMALT2]
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* [http://bigg.ucsd.edu/universal/reactions/BDG2HCGHD BDG2HCGHD]
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* [http://bigg.ucsd.edu/universal/reactions/BFFS BFFS]
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* [http://bigg.ucsd.edu/universal/reactions/BGLA BGLA]
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* [http://bigg.ucsd.edu/universal/reactions/CEPA CEPA]
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* [http://bigg.ucsd.edu/universal/reactions/DNADDP DNADDP]
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* [http://bigg.ucsd.edu/universal/reactions/DPCOAPP DPCOAPP]
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* [http://bigg.ucsd.edu/universal/reactions/FA100ACPHi FA100ACPHi]
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* [http://bigg.ucsd.edu/universal/reactions/FA100ACPHi_1 FA100ACPHi_1]
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* [http://bigg.ucsd.edu/universal/reactions/FA120ACPHi FA120ACPHi]
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* [http://bigg.ucsd.edu/universal/reactions/FA120ACPHi_1 FA120ACPHi_1]
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* [http://bigg.ucsd.edu/universal/reactions/FA80ACPHi FA80ACPHi]
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* [http://bigg.ucsd.edu/universal/reactions/FA80ACPHi_1 FA80ACPHi_1]
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* [http://bigg.ucsd.edu/universal/reactions/FADDP FADDP]
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* [http://bigg.ucsd.edu/universal/reactions/G1PCTYT G1PCTYT]
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* [http://bigg.ucsd.edu/universal/reactions/G6PI2 G6PI2]
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* [http://bigg.ucsd.edu/universal/reactions/G6PI3 G6PI3]
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* [http://bigg.ucsd.edu/universal/reactions/G6PI_1 G6PI_1]
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* [http://bigg.ucsd.edu/universal/reactions/G6PIh G6PIh]
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* [http://bigg.ucsd.edu/universal/reactions/G6PP G6PP]
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* [http://bigg.ucsd.edu/universal/reactions/G6PPer G6PPer]
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* [http://bigg.ucsd.edu/universal/reactions/GLBRAN2 GLBRAN2]
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* [http://bigg.ucsd.edu/universal/reactions/GLCP2 GLCP2]
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* [http://bigg.ucsd.edu/universal/reactions/GLCS1 GLCS1]
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* [http://bigg.ucsd.edu/universal/reactions/GLDBRAN2 GLDBRAN2]
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* [http://bigg.ucsd.edu/universal/reactions/GLGC GLGC]
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* [http://bigg.ucsd.edu/universal/reactions/GLPThi GLPThi]
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* [http://bigg.ucsd.edu/universal/reactions/GLUKA GLUKA]
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* [http://bigg.ucsd.edu/universal/reactions/GLUKAh GLUKAh]
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* [http://bigg.ucsd.edu/universal/reactions/MLTG1e MLTG1e]
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* [http://bigg.ucsd.edu/universal/reactions/MLTG1ly MLTG1ly]
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* [http://bigg.ucsd.edu/universal/reactions/MLTP1 MLTP1]
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* [http://bigg.ucsd.edu/universal/reactions/MLTP2 MLTP2]
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* [http://bigg.ucsd.edu/universal/reactions/MLTP3 MLTP3]
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* [http://bigg.ucsd.edu/universal/reactions/MTI MTI]
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* [http://bigg.ucsd.edu/universal/reactions/NADDPe NADDPe]
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* [http://bigg.ucsd.edu/universal/reactions/NADDPp NADDPp]
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* [http://bigg.ucsd.edu/universal/reactions/NPH NPH]
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* [http://bigg.ucsd.edu/universal/reactions/PGIA PGIA]
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* [http://bigg.ucsd.edu/universal/reactions/PGIAh PGIAh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGIBh PGIBh]
 +
* [http://bigg.ucsd.edu/universal/reactions/RAFHpp RAFHpp]
 +
* [http://bigg.ucsd.edu/universal/reactions/SAGH SAGH]
 +
* [http://bigg.ucsd.edu/universal/reactions/SGHA SGHA]
 +
* [http://bigg.ucsd.edu/universal/reactions/SPP SPP]
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* [http://bigg.ucsd.edu/universal/reactions/SPS SPS]
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* [http://bigg.ucsd.edu/universal/reactions/SUCRe SUCRe]
 +
* [http://bigg.ucsd.edu/universal/reactions/TRE6PP TRE6PP]
 +
* [http://bigg.ucsd.edu/universal/reactions/TRE6PS TRE6PS]
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* [http://bigg.ucsd.edu/universal/reactions/TREH TREH]
 +
* [http://bigg.ucsd.edu/universal/reactions/TREHe TREHe]
 +
* [http://bigg.ucsd.edu/universal/reactions/TREHpp TREHpp]
 +
* [http://bigg.ucsd.edu/universal/reactions/TREHv TREHv]
 +
* [http://bigg.ucsd.edu/universal/reactions/UDPGP UDPGP]
 +
* [http://bigg.ucsd.edu/universal/reactions/UDPGPpp UDPGPpp]
 +
* [http://bigg.ucsd.edu/universal/reactions/UFAGT UFAGT]
 +
* [http://bigg.ucsd.edu/universal/reactions/UG6PGT UG6PGT]
 +
* [http://bigg.ucsd.edu/universal/reactions/UG6PGTn UG6PGTn]
 
== External links  ==
 
== External links  ==
−
* RHEA:
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{{#set: common_name=Starch and sucrose metabolism}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10912 10912]
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{{#set: reaction found=15}}
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* BioCyc : META:PANTOATE-BETA-ALANINE-LIG-RXN
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{{#set: total reaction=81}}
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* MetaNetX (MNX) Equation : MNXR102345
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{{#set: completion rate=19.0}}
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* KEGG Reaction : R02473
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−
* EC Number : 6.3.2.1
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−
{{#set: direction=LEFT-TO-RIGHT}}
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−
{{#set: common name=Pantothenate synthase}}
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−
{{#set: gene associated=EF1859}}
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−
{{#set: in pathway=map01100|map01110|map00770|map00410}}
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−
{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|b_subtilis_subsp_subtilis_str168}}
+

Revision as of 18:27, 18 March 2018

Pathway map00500

  • common_name:
    • Starch and sucrose metabolism
  • Synonym(s):

Reaction(s) found

15 reactions found over 81 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=E4p&oldid=7316"