Difference between revisions of "Lald L"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACGALpts_manual ACGALpts_manual] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formul...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250] == * common_name: ** Alanine, aspartate and glutamate metabolism * Synonym(s): ==...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ACGALpts_manual ACGALpts_manual] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Alanine, aspartate and glutamate metabolism
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''22''' reactions found over '''93''' reactions in the full pathway
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** 1.0 [[pep]][c] '''+''' 1.0 [[acgal]][e] '''=>''' 1.0 [[acgal6p]][c] '''+''' 1.0 [[pyr]][c]
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* [[ADSL1r]]
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* With common name(s):
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** 1 associated gene(s):
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** 1.0 Phosphoenolpyruvate[c] '''+''' 1.0 N-Acetyl-D-galactosamine[e] '''=>''' 1.0 N Acetyl D galactosamine 6 phosphate C8H16NO9P[c] '''+''' 1.0 Pyruvate[c]
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*** [[EF2361]]
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** 3 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[EF2267|EF0628ANDEF3042|EF0628ANDEF3043|EF0628ANDEF3045|EF0628ANDEF0709ANDEF0710]]
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*** [[orthology-l_plantarum_wcfs1]]
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** MANUAL
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* [[ADSL2r]]
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== Pathways  ==
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** 1 associated gene(s):
−
== Reconstruction information  ==
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*** [[EF2361]]
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* [[manual]]:
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** 3 reconstruction source(s) associated:
−
** [[manual curation]]
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
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* [[ADSS]]
 +
** 1 associated gene(s):
 +
*** [[EF0014]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
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* [[AGTi]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 +
* [[ALATA_L]]
 +
** 3 associated gene(s):
 +
*** [[EF2372]]
 +
*** [[EF1314]]
 +
*** [[EF1706]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* [[ASNN]]
 +
** 2 associated gene(s):
 +
*** [[EF1163]]
 +
*** [[EF1158]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[ASP1DC]]
 +
** 1 associated gene(s):
 +
*** [[EF1858]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[ASPCT]]
 +
** 1 associated gene(s):
 +
*** [[EF1719]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[ASPO1]]
 +
** 1 associated gene(s):
 +
*** [[EF2556]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[ASPO6]]
 +
** 1 associated gene(s):
 +
*** [[EF2556]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[ASPTA]]
 +
** 1 associated gene(s):
 +
*** [[EF2372]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[CBPS]]
 +
** 2 associated gene(s):
 +
*** [[EF1716]]
 +
*** [[EF1717]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[GF6PTA]]
 +
** 1 associated gene(s):
 +
*** [[EF2151]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[GLNS]]
 +
** 1 associated gene(s):
 +
*** [[EF2159]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[GLUDC]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 +
* [[GLUDxi]]
 +
** 1 associated gene(s):
 +
*** [[EF1415]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[GLUDy]]
 +
** 1 associated gene(s):
 +
*** [[EF1415]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[GLUN]]
 +
** 1 associated gene(s):
 +
*** [[EF1163]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-2_reaction_to_add_delete]]
 +
* [[GLUPRT]]
 +
** 1 associated gene(s):
 +
*** [[EF1781]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[GLYTA]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 +
* [[SSALx]]
 +
** 1 associated gene(s):
 +
*** [[EF0253]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[SSALy]]
 +
** 1 associated gene(s):
 +
*** [[EF0253]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/3SALATAi 3SALATAi]
 +
* [http://bigg.ucsd.edu/universal/reactions/3SALATAim 3SALATAim]
 +
* [http://bigg.ucsd.edu/universal/reactions/4HGLSD 4HGLSD]
 +
* [http://bigg.ucsd.edu/universal/reactions/4HGLSDm 4HGLSDm]
 +
* [http://bigg.ucsd.edu/universal/reactions/AATC AATC]
 +
* [http://bigg.ucsd.edu/universal/reactions/AATG AATG]
 +
* [http://bigg.ucsd.edu/universal/reactions/AATGm AATGm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ABTA ABTA]
 +
* [http://bigg.ucsd.edu/universal/reactions/ABTArm ABTArm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ADSSh ADSSh]
 +
* [http://bigg.ucsd.edu/universal/reactions/AGTim AGTim]
 +
* [http://bigg.ucsd.edu/universal/reactions/AGTix AGTix]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALAD_L ALAD_L]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALATA_Lm ALATA_Lm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ARGDh ARGDh]
 +
* [http://bigg.ucsd.edu/universal/reactions/ARGSL ARGSL]
 +
* [http://bigg.ucsd.edu/universal/reactions/ARGSS ARGSS]
 +
* [http://bigg.ucsd.edu/universal/reactions/ARGSS_1 ARGSS_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASNNe ASNNe]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASNNm ASNNm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASNNpp ASNNpp]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASNS1 ASNS1]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASNS2 ASNS2]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASP4DC ASP4DC]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPATh ASPATh]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPCT_1 ASPCT_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPCTm ASPCTm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPCTn ASPCTn]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPNATm ASPNATm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPO6_1 ASPO6_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPOcm ASPOcm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPOm ASPOm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPR ASPR]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPSE ASPSE]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPT ASPT]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPTA6 ASPTA6]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPTAm ASPTAm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPTAp ASPTAp]
 +
* [http://bigg.ucsd.edu/universal/reactions/CBPSam CBPSam]
 +
* [http://bigg.ucsd.edu/universal/reactions/CBPSn CBPSn]
 +
* [http://bigg.ucsd.edu/universal/reactions/CPS CPS]
 +
* [http://bigg.ucsd.edu/universal/reactions/CYSSADS CYSSADS]
 +
* [http://bigg.ucsd.edu/universal/reactions/DASPO1p DASPO1p]
 +
* [http://bigg.ucsd.edu/universal/reactions/GALh GALh]
 +
* [http://bigg.ucsd.edu/universal/reactions/GALm GALm]
 +
* [http://bigg.ucsd.edu/universal/reactions/GAM GAM]
 +
* [http://bigg.ucsd.edu/universal/reactions/GDH GDH]
 +
* [http://bigg.ucsd.edu/universal/reactions/GDH1 GDH1]
 +
* [http://bigg.ucsd.edu/universal/reactions/GDH_nadp GDH_nadp]
 +
* [http://bigg.ucsd.edu/universal/reactions/GF6PTA_1 GF6PTA_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLNSP1 GLNSP1]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLNSP2 GLNSP2]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLNSP3 GLNSP3]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLUDym GLUDym]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLUNm GLUNm]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLUNpp GLUNpp]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLUS GLUS]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLUS_nadph GLUS_nadph]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLUSx GLUSx]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLUSy GLUSy]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLYTA_1 GLYTA_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/HCGALm HCGALm]
 +
* [http://bigg.ucsd.edu/universal/reactions/LCYSTAT LCYSTAT]
 +
* [http://bigg.ucsd.edu/universal/reactions/LCYSTATm LCYSTATm]
 +
* [http://bigg.ucsd.edu/universal/reactions/NACASPAH NACASPAH]
 +
* [http://bigg.ucsd.edu/universal/reactions/P5CD P5CD]
 +
* [http://bigg.ucsd.edu/universal/reactions/P5CDm P5CDm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PRDPARh PRDPARh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PUTA3 PUTA3]
 +
* [http://bigg.ucsd.edu/universal/reactions/SSALxm SSALxm]
 +
* [http://bigg.ucsd.edu/universal/reactions/SSNOh SSNOh]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common_name=Alanine, aspartate and glutamate metabolism}}
−
{{#set: gene associated=EF2267|EF0628ANDEF3042|EF0628ANDEF3043|EF0628ANDEF3045|EF0628ANDEF0709ANDEF0710}}
+
{{#set: reaction found=22}}
−
{{#set: in pathway=}}
+
{{#set: total reaction=93}}
−
{{#set: reconstruction category=manual}}
+
{{#set: completion rate=24.0}}
−
{{#set: reconstruction source=manual curation}}
+

Revision as of 18:28, 18 March 2018

Pathway map00250

  • common_name:
    • Alanine, aspartate and glutamate metabolism
  • Synonym(s):

Reaction(s) found

22 reactions found over 93 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=Lald_L&oldid=7344"