Difference between revisions of "TransportSeed 4abz"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PGM_1 PGM_1] == * direction: ** REVERSIBLE * common name: ** phosphoglycerate mutase * Synonym(s):...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPND PPND] == * direction: ** LEFT-TO-RIGHT * common name: ** Prephenate dehydrogenase * Synonym(s)...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/PPND PPND] == |
* direction: | * direction: | ||
| − | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
| − | ** | + | ** Prephenate dehydrogenase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[pphn]][c] '''+''' 1.0 [[nad]][c] '''=>''' 1.0 [[34hpp]][c] '''+''' 1.0 [[co2]][c] '''+''' 1.0 [[nadh]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 Prephenate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''=>''' 1.0 3-(4-Hydroxyphenyl)pyruvate[c] '''+''' 1.0 CO2 CO2[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[EF1565]] |
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
** [[pantograph]]-[[l_plantarum_wcfs1]] | ** [[pantograph]]-[[l_plantarum_wcfs1]] | ||
| + | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
== Pathways == | == Pathways == | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]] | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| − | * [[ | + | ** Source: [[orthology-l_plantarum_wcfs1]] |
| − | ** [[ | + | *** Tool: [[pantograph]] |
== External links == | == External links == | ||
| − | {{#set: direction= | + | * RHEA: |
| − | {{#set: common name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13869 13869] |
| − | {{#set: gene associated= | + | * BioCyc : META:PREPHENATEDEHYDROG-RXN |
| + | * MetaNetX (MNX) Equation : MNXR103121 | ||
| + | * KEGG Reaction : R01728 | ||
| + | * EC Number : 1.3.1.12 | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Prephenate dehydrogenase}} | ||
| + | {{#set: gene associated=EF1565}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
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| − | |||
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Revision as of 18:32, 18 March 2018
Contents
Reaction PPND
- direction:
- LEFT-TO-RIGHT
- common name:
- Prephenate dehydrogenase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Prephenate[c] + 1.0 Nicotinamide adenine dinucleotide[c] => 1.0 3-(4-Hydroxyphenyl)pyruvate[c] + 1.0 CO2 CO2[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
External links
- RHEA:
- BioCyc : META:PREPHENATEDEHYDROG-RXN
- MetaNetX (MNX) Equation : MNXR103121
- KEGG Reaction : R01728
- EC Number : 1.3.1.12
