Difference between revisions of "Hpa"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MNNH MNNH] == * direction: ** LEFT-TO-RIGHT * common name: ** D-mannonate hydrolyase * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FOMETRi FOMETRi] == * direction: ** LEFT-TO-RIGHT * common name: ** Aminomethyltransferase * Synony...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/MNNH MNNH] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/FOMETRi FOMETRi] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** D-mannonate hydrolyase
+
** Aminomethyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[mana]][c] '''=>''' 1.0 [[2ddglcn]][c] '''+''' 1.0 [[h2o]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[5fthf]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[methf]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 D-Mannonate[c] '''=>''' 1.0 2-Dehydro-3-deoxy-D-gluconate[c] '''+''' 1.0 H2O H2O[c]
+
** 1.0 H+[c] '''+''' 1.0 5-Formyltetrahydrofolate[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 5,10-Methenyltetrahydrofolate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF3135]]
+
* [[EF2791]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
+
* [[map00670]]: [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670]
** '''15''' reactions found over '''54''' reactions in the full pathway
+
** '''14''' reactions found over '''65''' reactions in the full pathway
 +
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
 +
** '''23''' reactions found over '''133''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20097 20097]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34767 34767]
* BioCyc : META:MANNONDEHYDRAT-RXN
+
* MetaNetX (MNX) Equation : MNXR99614
* MetaNetX (MNX) Equation : MNXR101679
+
* KEGG Reaction : R02300
* KEGG Reaction : R05606
+
* EC Number : 2.1.2.10
* EC Number : 4.2.1.8
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=D-mannonate hydrolyase}}
+
{{#set: common name=Aminomethyltransferase}}
{{#set: gene associated=EF3135}}
+
{{#set: gene associated=EF2791}}
{{#set: in pathway=map01100|map00040}}
+
{{#set: in pathway=map01100|map00670|map00260}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|b_subtilis_subsp_subtilis_str168}}
 

Revision as of 18:34, 18 March 2018

Reaction FOMETRi

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Aminomethyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 5-Formyltetrahydrofolate[c] => 1.0 H2O H2O[c] + 1.0 5,10-Methenyltetrahydrofolate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR99614
  • KEGG Reaction : R02300
  • EC Number : 2.1.2.10