Difference between revisions of "Iscu 4fe4s"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OGMEACPD OGMEACPD] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-Oxo-glutaryl-[ACP] methyl e...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLXO3r GLXO3r] == * direction: ** REVERSIBLE * common name: ** Glyoxylate dehydrogenase * Synonym(s...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/OGMEACPD OGMEACPD] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLXO3r GLXO3r] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** 3-Oxo-glutaryl-[ACP] methyl ester dehydratase
+
** Glyoxylate dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[hgmeACP]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[egmeACP]][c]
+
** 1.0 [[glx]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[o2]][c] '''<=>''' 1.0 [[h2o2]][c] '''+''' 1.0 [[oxa]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 3-Hydroxyglutaryl-[acyl-carrier protein] methyl ester[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 Enoylglutaryl-[acyl-carrier protein] methyl ester[c]
+
** 1.0 Glyoxylate[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 O2 O2[c] '''<=>''' 1.0 Hydrogen peroxide[c] '''+''' 1.0 Oxalate[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF0284]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
−
* [[EF2878]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00780]]: [http://www.genome.jp/dbget-bin/www_bget?map00780 map00780]
+
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
−
** '''26''' reactions found over '''67''' reactions in the full pathway
+
** '''21''' reactions found over '''129''' reactions in the full pathway
−
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
+
−
** '''65''' reactions found over '''160''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[gap-filling]]
−
** [[pantograph]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
−
* BioCyc : META:RXN-11477
+
* EC Number : 1.2.3.5
−
* MetaNetX (MNX) Equation : MNXR102159
+
* BioCyc : META:GLYOXYLATE-OXIDASE-RXN
−
* KEGG Reaction : R10117
+
* MetaNetX (MNX) Equation : MNXR100305
−
* EC Number : 4.2.1.59
+
* RHEA:
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14837 14837]
−
{{#set: common name=3-Oxo-glutaryl-[ACP] methyl ester dehydratase}}
+
* Reactome : REACT_R-ATH-389862
−
{{#set: gene associated=EF0284|EF2878}}
+
* KEGG Reaction : R00466
−
{{#set: in pathway=map01100|map00780|map00061}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common name=Glyoxylate dehydrogenase}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=map01100|map00630}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
+
{{#set: reconstruction category=gap-filling}}
 +
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
 +
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}

Revision as of 18:35, 18 March 2018

Reaction GLXO3r

  • direction:
    • REVERSIBLE
  • common name:
    • Glyoxylate dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Glyoxylate[c] + 1.0 H2O H2O[c] + 1.0 O2 O2[c] <=> 1.0 Hydrogen peroxide[c] + 1.0 Oxalate[c] + 1.0 H+[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • EC Number : 1.2.3.5
  • BioCyc : META:GLYOXYLATE-OXIDASE-RXN
  • MetaNetX (MNX) Equation : MNXR100305
  • RHEA:
  • Reactome : REACT_R-ATH-389862
  • KEGG Reaction : R00466




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