Difference between revisions of "PPAKr"
From metabolic_network
(Created page with "Category:Gene == Gene EF1363 == * Synonym(s): == Reactions associated == * HMGCOAS ** pantograph-l_plantarum_wcfs1 * HMGCOASi ** pantograph-b_subtil...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ASPO1 ASPO1] == * direction: ** LEFT-TO-RIGHT * common name: ** L-aspartate oxidase * Synonym(s):...") |
||
| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/ASPO1 ASPO1] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** L-aspartate oxidase | ||
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** [[ | + | ** 1.0 [[h2o]][c] '''+''' 1.0 [[asp__L]][c] '''+''' 1.0 [[o2]][c] '''=>''' 1.0 [[oaa]][c] '''+''' 1.0 [[nh4]][c] '''+''' 1.0 [[h2o2]][c] |
| − | * [[ | + | * With common name(s): |
| + | ** 1.0 H2O H2O[c] '''+''' 1.0 L-Aspartate[c] '''+''' 1.0 O2 O2[c] '''=>''' 1.0 Oxaloacetate[c] '''+''' 1.0 Ammonium[c] '''+''' 1.0 Hydrogen peroxide[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * [[EF2556]] | ||
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
| − | == Pathways | + | == Pathways == |
| − | * [[map01100]] | + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] |
| − | * [[ | + | ** '''460''' reactions found over '''2349''' reactions in the full pathway |
| − | * [[ | + | * [[map00280]]: [http://www.genome.jp/dbget-bin/www_bget?map00280 map00280] |
| − | * [[ | + | ** '''9''' reactions found over '''155''' reactions in the full pathway |
| − | * [[ | + | * [[map00350]]: [http://www.genome.jp/dbget-bin/www_bget?map00350 map00350] |
| − | * [[ | + | ** '''9''' reactions found over '''102''' reactions in the full pathway |
| − | * [[ | + | * [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270] |
| + | ** '''25''' reactions found over '''135''' reactions in the full pathway | ||
| + | * [[map00950]]: [http://www.genome.jp/dbget-bin/www_bget?map00950 map00950] | ||
| + | ** '''3''' reactions found over '''33''' reactions in the full pathway | ||
| + | * [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250] | ||
| + | ** '''22''' reactions found over '''93''' reactions in the full pathway | ||
| + | * [[map00360]]: [http://www.genome.jp/dbget-bin/www_bget?map00360 map00360] | ||
| + | ** '''7''' reactions found over '''109''' reactions in the full pathway | ||
| + | * [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400] | ||
| + | ** '''13''' reactions found over '''59''' reactions in the full pathway | ||
| + | * [[map00380]]: [http://www.genome.jp/dbget-bin/www_bget?map00380 map00380] | ||
| + | ** '''7''' reactions found over '''163''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: pathway | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19025 19025] |
| + | * MetaNetX (MNX) Equation : MNXR96088 | ||
| + | * KEGG Reaction : R00357 | ||
| + | * EC Number : 1.4.3.16 | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=L-aspartate oxidase}} | ||
| + | {{#set: gene associated=EF2556}} | ||
| + | {{#set: in pathway=map01100|map00280|map00350|map00270|map00950|map00250|map00360|map00400|map00380}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Revision as of 18:35, 18 March 2018
Contents
Reaction ASPO1
- direction:
- LEFT-TO-RIGHT
- common name:
- L-aspartate oxidase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 H2O H2O[c] + 1.0 L-Aspartate[c] + 1.0 O2 O2[c] => 1.0 Oxaloacetate[c] + 1.0 Ammonium[c] + 1.0 Hydrogen peroxide[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map00280: map00280
- 9 reactions found over 155 reactions in the full pathway
- map00350: map00350
- 9 reactions found over 102 reactions in the full pathway
- map00270: map00270
- 25 reactions found over 135 reactions in the full pathway
- map00950: map00950
- 3 reactions found over 33 reactions in the full pathway
- map00250: map00250
- 22 reactions found over 93 reactions in the full pathway
- map00360: map00360
- 7 reactions found over 109 reactions in the full pathway
- map00400: map00400
- 13 reactions found over 59 reactions in the full pathway
- map00380: map00380
- 7 reactions found over 163 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
External links
- RHEA:
- MetaNetX (MNX) Equation : MNXR96088
- KEGG Reaction : R00357
- EC Number : 1.4.3.16
