Difference between revisions of "EF0631"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK9 NDPK9] == * direction: ** REVERSIBLE * common name: ** Nucleoside diphosphate kinase ATPIDP...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/2HBO 2HBO] == * direction: ** REVERSIBLE * common name: ** 2 HydroxybutyrateNAD oxidoreductase * Sy...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK9 NDPK9] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/2HBO 2HBO] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** Nucleoside diphosphate kinase  ATPIDP
+
** 2 HydroxybutyrateNAD oxidoreductase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[idp]][c] '''<=>''' 1.0 [[itp]][c] '''+''' 1.0 [[adp]][c]
+
** 1.0 [[2hb]][c] '''+''' 1.0 [[nad]][c] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[2obut]][c] '''+''' 1.0 [[nadh]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 IDP C10H11N4O11P2[c] '''<=>''' 1.0 ITP C10H11N4O14P3[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
+
** 1.0 2 Hydroxybutyrate C4H7O3[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''<=>''' 1.0 H+[c] '''+''' 1.0 2-Oxobutanoate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF1036]]
 
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
−
** '''82''' reactions found over '''244''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''135''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''97''' reactions found over '''298''' reactions in the full pathway
+
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00640]]: [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640]
 +
** '''15''' reactions found over '''143''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 +
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
 +
** '''25''' reactions found over '''135''' reactions in the full pathway
 +
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
 +
** '''31''' reactions found over '''163''' reactions in the full pathway
 +
* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
 +
** '''24''' reactions found over '''149''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[gap-filling]]
−
** [[pantograph]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[l_plantarum_wcfs1]]
+
*** Tool: [[meneco]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30347 30347]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=36371 36371]
−
* BioCyc : META:RXN-14120
+
* MetaNetX (MNX) Equation : MNXR94796
−
* MetaNetX (MNX) Equation : MNXR101941
+
* KEGG Reaction : R01000
−
* KEGG Reaction : R00722
+
* EC Number : 1.1.1.27
−
* EC Number : 2.7.4.6
+
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Nucleoside diphosphate kinase  ATPIDP }}
+
{{#set: common name=2 HydroxybutyrateNAD oxidoreductase}}
−
{{#set: gene associated=EF1036}}
+
{{#set: in pathway=map01100|map01110|map00640|map01120|map00270|map00620|map00010|map01130}}
−
{{#set: in pathway=map00240|map01130|map01110|map01100|map00230}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction comment=added for gapfilling}}

Revision as of 18:35, 18 March 2018

Reaction 2HBO

  • direction:
    • REVERSIBLE
  • common name:
    • 2 HydroxybutyrateNAD oxidoreductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 2 Hydroxybutyrate C4H7O3[c] + 1.0 Nicotinamide adenine dinucleotide[c] <=> 1.0 H+[c] + 1.0 2-Oxobutanoate[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR94796
  • KEGG Reaction : R01000
  • EC Number : 1.1.1.27




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