Difference between revisions of "EF3148"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/URIDK2r_copy2 URIDK2r_copy2] == * direction: ** REVERSIBLE * common name: ** Uridylate kinase (dUMP...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MCTP1Appc MCTP1Appc] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/URIDK2r_copy2 URIDK2r_copy2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/MCTP1Appc MCTP1Appc] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
* common name:
+
** Uridylate kinase (dUMP)
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[atp]][c] '''+''' 1.0 [[dump]][c] '''<=>''' 1.0 [[dudp]][c] '''+''' 1.0 [[adp]][c]
+
** 1.0 [[murein5p5p]][c] '''=>''' 1.0 [[murein5px4p]][c] '''+''' 1.0 [[ala__D]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 DUMP C9H11N2O8P[c] '''<=>''' 1.0 DUDP C9H11N2O11P2[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
+
** 1.0 Two linked disacharide pentapeptide murein units (uncrosslinked, middle of chain)[c] '''=>''' 1.0 Two disacharide linked murein units, pentapeptide crosslinked tetrapeptide (A2pm->D-ala) (middle of chain)[c] '''+''' 1.0 D-Alanine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2764]]
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* [[EF0991]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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** 1_new_rxn_for_biomass
 +
* [[EF1740]]
 +
** 1_new_rxn_for_biomass
 +
* [[EF0680]]
 +
** 1_new_rxn_for_biomass
 +
* [[EF1148]]
 +
** 1_new_rxn_for_biomass
 +
* [[EF2476]]
 +
** 1_new_rxn_for_biomass
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[manual]]
** [[pantograph]]:
+
** Source: [[manual-1_new_rxn_for_biomass]]
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
* [[manual]]:
+
** [[curation_from_orthology]]
+
 
== External links  ==
 
== External links  ==
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Uridylate kinase (dUMP)}}
+
{{#set: gene associated=EF0991|EF1740|EF0680|EF1148|EF2476}}
{{#set: gene associated=EF2764}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
{{#set: reconstruction source=curation_from_orthology}}
+
{{#set: reconstruction source=manual-1_new_rxn_for_biomass}}
 +
{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}

Revision as of 18:35, 18 March 2018

Reaction MCTP1Appc

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Two linked disacharide pentapeptide murein units (uncrosslinked, middle of chain)[c] => 1.0 Two disacharide linked murein units, pentapeptide crosslinked tetrapeptide (A2pm->D-ala) (middle of chain)[c] + 1.0 D-Alanine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links