Difference between revisions of "2ddglcn"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/nadh nadh] == * common name: ** Nicotinamide adenine dinucleotide - reduced * Synonym(s): ==...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FCLT FCLT] == * direction: ** LEFT-TO-RIGHT * common name: ** Ferrochelatase * Synonym(s): == Reac...")
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/nadh nadh] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/FCLT FCLT] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Nicotinamide adenine dinucleotide - reduced
+
** Ferrochelatase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
* [[LALDO2x]]
+
* With identifiers:
* [[EAR180x]]
+
** 1.0 [[fe2]][c] '''+''' 1.0 [[ppp9]][c] '''=>''' 1.0 [[pheme]][c] '''+''' 2.0 [[h]][c]
* [[DMBZIDS2]]
+
* With common name(s):
* [[NADHPO]]
+
** 1.0 Fe2+ mitochondria[c] '''+''' 1.0 Protoporphyrin[c] '''=>''' 1.0 Protoheme C34H30FeN4O4[c] '''+''' 2.0 H+[c]
* [[OCMAT3_manual]]
+
 
* [[DKGLCNR2x]]
+
== Genes associated with this reaction  ==
* [[HDMAT7_manual]]
+
Genes have been associated with this reaction based on different elements listed below.
* [[DKII]]
+
* [[EF1989]]
* [[NADH10]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
* [[EAR141x]]
+
== Pathways  ==
* [[HPYRRx]]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
* [[ALR4x]]
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
* [[2DGULRx]]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
* [[EAR161x]]
+
** '''179''' reactions found over '''1054''' reactions in the full pathway
* [[EAR120x]]
+
* [[map00860]]: [http://www.genome.jp/dbget-bin/www_bget?map00860 map00860]
* [[TDMAT6_manual]]
+
** '''4''' reactions found over '''106''' reactions in the full pathway
* [[EAR60x]]
+
== Reconstruction information  ==
* [[PYROX]]
+
* Category: [[orthology]]
* [[EAR181x]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
* [[EAR40x]]
+
*** Tool: [[pantograph]]
* [[EAR140x]]
+
* [[HEMAT2_manual]]
+
* [[NADH4]]
+
* [[NADH5]]
+
* [[NADH9]]
+
* [[EAR160x]]
+
* [[2DGULRGx]]
+
* [[EAR121x]]
+
* [[NOX2]]
+
* [[NOX]]
+
* [[OCDMAT8_manual]]
+
* [[GLYCLTDx]]
+
* [[DHPTDNRN]]
+
* [[EAR100x]]
+
* [[EAR80x]]
+
== Reaction(s) known to produce the compound ==
+
* [[G1Dx]]
+
* [[PDH]]
+
* [[HIBD_manual]]
+
* [[SBTD_L]]
+
* [[ALDD31_1]]
+
* [[ME1]]
+
* [[GLXO1]]
+
* [[LCADi]]
+
* [[GLYCDx]]
+
* [[PGCD]]
+
* [[AASS_c]]
+
* [[IMPD]]
+
* [[OIVD2]]
+
* [[URDGLYCD]]
+
* [[ALDD8]]
+
* [[ALDD9]]
+
* [[ABUTD]]
+
* [[OIVD3]]
+
* [[ALDD1]]
+
* [[PPND]]
+
* [[ALDD3]]
+
* [[ALDD4]]
+
* [[ALDD5]]
+
* [[ALDD20x_1]]
+
* [[AASAD3]]
+
* [[ALDD12]]
+
* [[ALDD13]]
+
* [[ALDD10]]
+
* [[ALDD2x]]
+
* [[ALDD16]]
+
* [[ALDD17]]
+
* [[ALDD14]]
+
* [[ALDD15]]
+
* [[ALDD18]]
+
* [[ALDD7]]
+
* [[ALDD6]]
+
* [[ALDD32]]
+
* [[GCALDD]]
+
* [[ALDD4x]]
+
* [[HXAND]]
+
* [[SSALx]]
+
* [[SBTD_D2]]
+
* [[ALDD11]]
+
* [[DHNAOT7]]
+
* [[XAND]]
+
== Reaction(s) of unknown directionality ==
+
* [[13PPDH]]
+
* [[GLUDxi]]
+
* [[G3PD1_manual]]
+
* [[TRSARr]]
+
* [[GLYALDDr]]
+
* [[GLYDHDA]]
+
* [[MDH]]
+
* [[HOXPRx]]
+
* [[ACALD]]
+
* [[SBTD]]
+
* [[ALCD2x]]
+
* [[LDH_D]]
+
* [[SBTPD]]
+
* [[BZDH]]
+
* [[2HBO]]
+
* [[GAPD]]
+
* [[LDH2]]
+
* [[OIVD1r]]
+
* [[E4PD]]
+
* [[QUINDH]]
+
* [[LDH_L]]
+
* [[DHORD_NAD]]
+
* [[SACCD2]]
+
* [[APPLDHr]]
+
* [[M1PD]]
+
* [[LCARS]]
+
 
== External links  ==
 
== External links  ==
{{#set: common name=Nicotinamide adenine dinucleotide - reduced}}
+
* RHEA:
{{#set: consumed by=LALDO2x|EAR180x|DMBZIDS2|NADHPO|OCMAT3_manual|DKGLCNR2x|HDMAT7_manual|DKII|NADH10|EAR141x|HPYRRx|ALR4x|2DGULRx|EAR161x|EAR120x|TDMAT6_manual|EAR60x|PYROX|EAR181x|EAR40x|EAR140x|HEMAT2_manual|NADH4|NADH5|NADH9|EAR160x|2DGULRGx|EAR121x|NOX2|NOX|OCDMAT8_manual|GLYCLTDx|DHPTDNRN|EAR100x|EAR80x}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22584 22584]
{{#set: produced by=G1Dx|PDH|HIBD_manual|SBTD_L|ALDD31_1|ME1|GLXO1|LCADi|GLYCDx|PGCD|AASS_c|IMPD|OIVD2|URDGLYCD|ALDD8|ALDD9|ABUTD|OIVD3|ALDD1|PPND|ALDD3|ALDD4|ALDD5|ALDD20x_1|AASAD3|ALDD12|ALDD13|ALDD10|ALDD2x|ALDD16|ALDD17|ALDD14|ALDD15|ALDD18|ALDD7|ALDD6|ALDD32|GCALDD|ALDD4x|HXAND|SSALx|SBTD_D2|ALDD11|DHNAOT7|XAND}}
+
* BioCyc : META:PROTOHEMEFERROCHELAT-RXN
{{#set: consumed or produced by=13PPDH|GLUDxi|G3PD1_manual|TRSARr|GLYALDDr|GLYDHDA|MDH|HOXPRx|ACALD|SBTD|ALCD2x|LDH_D|SBTPD|BZDH|2HBO|GAPD|LDH2|OIVD1r|E4PD|QUINDH|LDH_L|DHORD_NAD|SACCD2|APPLDHr|M1PD|LCARS}}
+
* MetaNetX (MNX) Equation : MNXR99471
 +
* KEGG Reaction : R00310
 +
* EC Number : 4.99.1.1
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Ferrochelatase}}
 +
{{#set: gene associated=EF1989}}
 +
{{#set: in pathway=map01100|map01110|map00860}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 18:36, 18 March 2018

Reaction FCLT

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ferrochelatase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Fe2+ mitochondria[c] + 1.0 Protoporphyrin[c] => 1.0 Protoheme C34H30FeN4O4[c] + 2.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:PROTOHEMEFERROCHELAT-RXN
  • MetaNetX (MNX) Equation : MNXR99471
  • KEGG Reaction : R00310
  • EC Number : 4.99.1.1