Difference between revisions of "Idon L"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP7 PUNP7] == * direction: ** REVERSIBLE * common name: ** Purine-nucleoside phosphorylase (Xanth...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/XYLI2 XYLI2] == * direction: ** REVERSIBLE * common name: ** Xylose isomerase * Synonym(s): == Rea...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP7 PUNP7] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/XYLI2 XYLI2] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** Purine-nucleoside phosphorylase (Xanthosine)
+
** Xylose isomerase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[pi]][c] '''+''' 1.0 [[xtsn]][c] '''<=>''' 1.0 [[r1p]][c] '''+''' 1.0 [[xan]][c]
+
** 1.0 [[glc__D]][c] '''<=>''' 1.0 [[fru]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Phosphate[c] '''+''' 1.0 Xanthosine[c] '''<=>''' 1.0 Alpha-D-Ribose 1-phosphate[c] '''+''' 1.0 Xanthine[c]
+
** 1.0 D-Glucose[c] '''<=>''' 1.0 D-Fructose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0187]]
+
* [[EF0556]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF0186]]
+
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
−
** '''82''' reactions found over '''244''' reactions in the full pathway
 
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
+
** '''15''' reactions found over '''54''' reactions in the full pathway
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
* [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051]
−
** '''97''' reactions found over '''298''' reactions in the full pathway
+
** '''22''' reactions found over '''63''' reactions in the full pathway
−
* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
+
−
** '''19''' reactions found over '''97''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27638 27638]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28546 28546]
−
* BioCyc : META:XANTHOSINEPHOSPHORY-RXN
+
* BioCyc : META:GLUCISOM-RXN
−
* MetaNetX (MNX) Equation : MNXR103349
+
* MetaNetX (MNX) Equation : MNXR105254
−
* KEGG Reaction : R02297
+
* KEGG Reaction : R00307
−
* EC Number : 2.4.2.-
+
* EC Number : 5.3.1.5
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Purine-nucleoside phosphorylase (Xanthosine)}}
+
{{#set: common name=Xylose isomerase}}
−
{{#set: gene associated=EF0187|EF0186}}
+
{{#set: gene associated=EF0556}}
−
{{#set: in pathway=map00240|map01100|map01110|map00230|map00760}}
+
{{#set: in pathway=map01100|map00040|map00051}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Revision as of 18:37, 18 March 2018

Reaction XYLI2

  • direction:
    • REVERSIBLE
  • common name:
    • Xylose isomerase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Glucose[c] <=> 1.0 D-Fructose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:GLUCISOM-RXN
  • MetaNetX (MNX) Equation : MNXR105254
  • KEGG Reaction : R00307
  • EC Number : 5.3.1.5




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