Difference between revisions of "Frdp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CPPPGO CPPPGO] == * direction: ** LEFT-TO-RIGHT * common name: ** Coproporphyrinogen oxidase (O2 re...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HMGCOAR HMGCOAR] == * direction: ** REVERSIBLE * common name: ** Hydroxymethylglutaryl CoA reductas...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/CPPPGO CPPPGO] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/HMGCOAR HMGCOAR] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Coproporphyrinogen oxidase (O2 required)
+
** Hydroxymethylglutaryl CoA reductase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[o2]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[cpppg3]][c] '''=>''' 1.0 [[pppg9]][c] '''+''' 2.0 [[co2]][c] '''+''' 2.0 [[h2o]][c]
+
** 1.0 [[mev__R]][c] '''+''' 1.0 [[coa]][c] '''+''' 2.0 [[nadp]][c] '''<=>''' 2.0 [[nadph]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[hmgcoa]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 O2 O2[c] '''+''' 2.0 H+[c] '''+''' 1.0 Coproporphyrinogen III[c] '''=>''' 1.0 Protoporphyrinogen IX[c] '''+''' 2.0 CO2 CO2[c] '''+''' 2.0 H2O H2O[c]
+
** 1.0 R  Mevalonate C6H11O4[c] '''+''' 1.0 Coenzyme A[c] '''+''' 2.0 Nicotinamide adenine dinucleotide phosphate[c] '''<=>''' 2.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 2.0 H+[c] '''+''' 1.0 Hydroxymethylglutaryl CoA C27H39N7O20P3S[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1305]]
+
* [[EF1364]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
** '''179''' reactions found over '''1054''' reactions in the full pathway
−
* [[map00860]]: [http://www.genome.jp/dbget-bin/www_bget?map00860 map00860]
+
* [[map00900]]: [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900]
−
** '''4''' reactions found over '''106''' reactions in the full pathway
+
** '''14''' reactions found over '''67''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR100659
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18257 18257]
+
* EC Number : 1.1.1.34
−
* BioCyc : META:RXN0-1461
+
{{#set: direction=REVERSIBLE}}
−
* MetaNetX (MNX) Equation : MNXR96880
+
{{#set: common name=Hydroxymethylglutaryl CoA reductase}}
−
* KEGG Reaction : R03220
+
{{#set: gene associated=EF1364}}
−
* EC Number : 1.3.3.3
+
{{#set: in pathway=map01100|map01130|map01110|map00900}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Coproporphyrinogen oxidase (O2 required)}}
+
−
{{#set: gene associated=EF1305}}
+
−
{{#set: in pathway=map01100|map01110|map00860}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 

Revision as of 19:38, 18 March 2018

Reaction HMGCOAR

  • direction:
    • REVERSIBLE
  • common name:
    • Hydroxymethylglutaryl CoA reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 R Mevalonate C6H11O4[c] + 1.0 Coenzyme A[c] + 2.0 Nicotinamide adenine dinucleotide phosphate[c] <=> 2.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 2.0 H+[c] + 1.0 Hydroxymethylglutaryl CoA C27H39N7O20P3S[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR100659
  • EC Number : 1.1.1.34




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