Difference between revisions of "Pant R"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ICITt10 ICITt10] == * direction: ** LEFT-TO-RIGHT * common name: ** Isocitrate transport in via Mg...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/URDGLYCD URDGLYCD] == * direction: ** LEFT-TO-RIGHT * common name: ** Ureidoglycolate dehydrogenase...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ICITt10 ICITt10] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/URDGLYCD URDGLYCD] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Isocitrate transport in via Mg complex
+
** Ureidoglycolate dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[mg2]][e] '''+''' 1.0 [[icit]][e] '''+''' 1.0 [[h]][e] '''=>''' 1.0 [[mg2]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[icit]][c]
+
** 1.0 [[urdglyc]][c] '''+''' 1.0 [[nad]][c] '''=>''' 1.0 [[oxur]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Magnesium[e] '''+''' 1.0 Isocitrate[e] '''+''' 1.0 H+[e] '''=>''' 1.0 Magnesium[c] '''+''' 1.0 H+[c] '''+''' 1.0 Isocitrate[c]
+
** 1.0 (-)-Ureidoglycolate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''=>''' 1.0 Oxalureate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF3327]]
+
* [[EF0388]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''97''' reactions found over '''298''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR100786
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15329 15329]
 +
* BioCyc : META:RXN0-7024
 +
* MetaNetX (MNX) Equation : MNXR105152
 +
* KEGG Reaction : R02935
 +
* EC Number : 1.1.1.154
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Isocitrate transport in via Mg complex}}
+
{{#set: common name=Ureidoglycolate dehydrogenase}}
{{#set: gene associated=EF3327}}
+
{{#set: gene associated=EF0388}}
{{#set: in pathway=}}
+
{{#set: in pathway=map00230|map01120}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 

Revision as of 18:38, 18 March 2018

Reaction URDGLYCD

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ureidoglycolate dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 (-)-Ureidoglycolate[c] + 1.0 Nicotinamide adenine dinucleotide[c] => 1.0 Oxalureate[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN0-7024
  • MetaNetX (MNX) Equation : MNXR105152
  • KEGG Reaction : R02935
  • EC Number : 1.1.1.154