Difference between revisions of "ACYP 2"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/ctbtcoa ctbtcoa] == * common name: ** Crotonobetainyl-CoA * Synonym(s): == Reaction(s) known...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UAAGDS UAAGDS] == * direction: ** LEFT-TO-RIGHT * common name: ** UDP-N-acetylmuramoyl-L-alanyl-D-g...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/ctbtcoa ctbtcoa] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/UAAGDS UAAGDS] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** Crotonobetainyl-CoA
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** UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate synthetase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[CTBTCAL2]]
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** 1.0 [[26dap__M]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[uamag]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[ugmd]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1.0 Meso-2,6-Diaminoheptanedioate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[EF0668]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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== Pathways  ==
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* [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550]
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** '''10''' reactions found over '''27''' reactions in the full pathway
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* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
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** '''13''' reactions found over '''34''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=Crotonobetainyl-CoA}}
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* MetaNetX (MNX) Equation : MNXR105013
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{{#set: produced by=CTBTCAL2}}
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* EC Number : 6.3.2.13
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate synthetase}}
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{{#set: gene associated=EF0668}}
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{{#set: in pathway=map00550|map00300}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 18:39, 18 March 2018

Reaction UAAGDS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Meso-2,6-Diaminoheptanedioate[c] + 1.0 ATP C10H12N5O13P3[c] + 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 Phosphate[c] + 1.0 H+[c] + 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR105013
  • EC Number : 6.3.2.13




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