Difference between revisions of "Indpyr"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPGPPDP PPGPPDP] == * direction: ** LEFT-TO-RIGHT * common name: ** Guanosine-3',5'-bis(diphosphate...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/G1PTT G1PTT] == * direction: ** LEFT-TO-RIGHT * common name: ** Glucose-1-phosphate thymidylyltrans...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPGPPDP PPGPPDP] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/G1PTT G1PTT] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
+
** Glucose-1-phosphate thymidylyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[ppgpp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[gdp]][c]
+
** 1.0 [[g1p]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[dttp]][c] '''=>''' 1.0 [[dtdpglu]][c] '''+''' 1.0 [[ppi]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Guanosine 3',5'-bis(diphosphate)[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 GDP C10H12N5O11P2[c]
+
** 1.0 D-Glucose 1-phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 DTTP C10H13N2O14P3[c] '''=>''' 1.0 DTDPglucose[c] '''+''' 1.0 Diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1974]]
+
* [[EF2194]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
* [[map00521]]: [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521]
** '''97''' reactions found over '''298''' reactions in the full pathway
+
** '''7''' reactions found over '''14''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00523]]: [http://www.genome.jp/dbget-bin/www_bget?map00523 map00523]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[map00525]]: [http://www.genome.jp/dbget-bin/www_bget?map00525 map00525]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14253 14253]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15225 15225]
* BioCyc : META:PPGPPSYN-RXN
+
* BioCyc : META:DTDPGLUCOSEPP-RXN
* MetaNetX (MNX) Equation : MNXR103109
+
* MetaNetX (MNX) Equation : MNXR99846
* KEGG Reaction : R00336
+
* KEGG Reaction : R02328
* EC Number : 3.1.7.2
+
* EC Number : 2.7.7.24
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase}}
+
{{#set: common name=Glucose-1-phosphate thymidylyltransferase}}
{{#set: gene associated=EF1974}}
+
{{#set: gene associated=EF2194}}
{{#set: in pathway=map00230}}
+
{{#set: in pathway=map00521|map01130|map00523|map00525}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
 

Revision as of 18:39, 18 March 2018

Reaction G1PTT

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glucose-1-phosphate thymidylyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Glucose 1-phosphate[c] + 1.0 H+[c] + 1.0 DTTP C10H13N2O14P3[c] => 1.0 DTDPglucose[c] + 1.0 Diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:DTDPGLUCOSEPP-RXN
  • MetaNetX (MNX) Equation : MNXR99846
  • KEGG Reaction : R02328
  • EC Number : 2.7.7.24