Difference between revisions of "Uamag"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ADSS ADSS] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenylosuccinate synthase * Synonym(s...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_ura ExchangeSeed_ura] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ADSS ADSS] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_ura ExchangeSeed_ura] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
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** REVERSIBLE
−
* common name:
+
−
** Adenylosuccinate synthase
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[gtp]][c] '''+''' 1.0 [[imp]][c] '''+''' 1.0 [[asp__L]][c] '''=>''' 1.0 [[dcamp]][c] '''+''' 1.0 [[gdp]][c] '''+''' 1.0 [[pi]][c] '''+''' 2.0 [[h]][c]
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** 1.0 [[ura]][C-BOUNDARY] '''<=>''' 1.0 [[ura]][e]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 GTP C10H12N5O14P3[c] '''+''' 1.0 IMP C10H11N4O8P[c] '''+''' 1.0 L-Aspartate[c] '''=>''' 1.0 N6-(1,2-Dicarboxyethyl)-AMP[c] '''+''' 1.0 GDP C10H12N5O11P2[c] '''+''' 1.0 Phosphate[c] '''+''' 2.0 H+[c]
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** 1.0 Uracil[C-BOUNDARY] '''<=>''' 1.0 Uracil[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF0014]]
 
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** [[pantograph]]-[[l_plantarum_wcfs1]]
 
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
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* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
 
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** '''22''' reactions found over '''93''' reactions in the full pathway
 
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
−
** '''97''' reactions found over '''298''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
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* Category: [[manual]]
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** [[pantograph]]:
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** Source: [[manual-import_from_medium]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[added to manage seeds from boundary to extracellular compartment]]
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*** [[l_plantarum_wcfs1]]
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−
*** [[b_subtilis_subsp_subtilis_str168]]
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== External links  ==
 
== External links  ==
−
* RHEA:
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{{#set: direction=REVERSIBLE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15753 15753]
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{{#set: in pathway=}}
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* BioCyc : META:ADENYLOSUCCINATE-SYNTHASE-RXN
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{{#set: reconstruction category=manual}}
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* MetaNetX (MNX) Equation : MNXR95495
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{{#set: reconstruction source=manual-import_from_medium}}
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* KEGG Reaction : R01135
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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* EC Number : 6.3.4.4
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−
{{#set: direction=LEFT-TO-RIGHT}}
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−
{{#set: common name=Adenylosuccinate synthase}}
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−
{{#set: gene associated=EF0014}}
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−
{{#set: in pathway=map01100|map00250|map00230}}
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−
{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+

Revision as of 18:39, 18 March 2018

Reaction ExchangeSeed_ura

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 ura[C-BOUNDARY] <=> 1.0 ura[e]
  • With common name(s):
    • 1.0 Uracil[C-BOUNDARY] <=> 1.0 Uracil[e]

Genes associated with this reaction

Pathways

Reconstruction information

External links

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