Difference between revisions of "Glcn"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_4abz ExchangeSeed_4abz] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formu...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SPMDabc SPMDabc] == * direction: ** LEFT-TO-RIGHT * common name: ** Spermidine transport via ABC sy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_4abz ExchangeSeed_4abz] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/SPMDabc SPMDabc] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** Spermidine transport via ABC system
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[4abz]][C-BOUNDARY] '''<=>''' 1.0 [[4abz]][e]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[spmd]][e] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[spmd]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 4-Aminobenzoate[C-BOUNDARY] '''<=>''' 1.0 4-Aminobenzoate[e]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Spermidine[e] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Spermidine[c] '''+''' 1.0 H+[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF2651]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF2650]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF2652]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF2649]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[added to manage seeds from boundary to extracellular compartment]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: direction=REVERSIBLE}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29999#1 29999#1]
 +
* MetaNetX (MNX) Equation : MNXR104494
 +
* EC Number : 3.6.3.31
 +
* BioCyc : META:ABC-24-RXN
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Spermidine transport via ABC system}}
 +
{{#set: gene associated=EF2651|EF2650|EF2652|EF2649}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=added to manage seeds from boundary to extracellular compartment}}
+
{{#set: reconstruction source=orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 18:39, 18 March 2018

Reaction SPMDabc

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Spermidine transport via ABC system
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 Spermidine[e] + 1.0 H2O H2O[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 Spermidine[c] + 1.0 H+[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR104494
  • EC Number : 3.6.3.31
  • BioCyc : META:ABC-24-RXN