Difference between revisions of "G3p"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AGTi AGTi] == * direction: ** REVERSIBLE * common name: ** Alanine glyoxylate aminotransferase irr...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GUAD GUAD] == * direction: ** LEFT-TO-RIGHT * common name: ** Guanine deaminase * Synonym(s): == R...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/AGTi AGTi] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GUAD GUAD] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Alanine glyoxylate aminotransferase  irreversible
+
** Guanine deaminase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[glx]][c] '''+''' 1.0 [[ala__L]][c] '''<=>''' 1.0 [[pyr]][c] '''+''' 1.0 [[gly]][c]
+
** 1.0 [[gua]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[xan]][c] '''+''' 1.0 [[nh4]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Glyoxylate[c] '''+''' 1.0 L-Alanine[c] '''<=>''' 1.0 Pyruvate[c] '''+''' 1.0 Glycine[c]
+
** 1.0 Guanine[c] '''+''' 1.0 H+[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Xanthine[c] '''+''' 1.0 Ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF2431]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
+
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
−
** '''25''' reactions found over '''135''' reactions in the full pathway
+
** '''97''' reactions found over '''298''' reactions in the full pathway
−
* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
+
−
** '''22''' reactions found over '''93''' reactions in the full pathway
+
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
+
−
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
+
−
** '''23''' reactions found over '''133''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* EC Number : 2.6.1.44
+
* EC Number : 3.5.4.3
−
* BioCyc : META:ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN
+
* BioCyc : META:GUANINE-DEAMINASE-RXN
−
* MetaNetX (MNX) Equation : MNXR95618
+
* MetaNetX (MNX) Equation : MNXR100464
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24248 24248]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14665 14665]
−
* Reactome : REACT_R-ATH-904864
+
* Reactome : REACT_R-BTA-74255
−
* KEGG Reaction : R00369
+
* KEGG Reaction : R01676
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Alanine glyoxylate aminotransferase  irreversible }}
+
{{#set: common name=Guanine deaminase}}
−
{{#set: in pathway=map01100|map00270|map00250|map01110|map00260}}
+
{{#set: gene associated=EF2431}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: in pathway=map01100|map00230}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 18:41, 18 March 2018

Reaction GUAD

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Guanine deaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Guanine[c] + 1.0 H+[c] + 1.0 H2O H2O[c] => 1.0 Xanthine[c] + 1.0 Ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 3.5.4.3
  • BioCyc : META:GUANINE-DEAMINASE-RXN
  • MetaNetX (MNX) Equation : MNXR100464
  • RHEA:
  • Reactome : REACT_R-BTA-74255
  • KEGG Reaction : R01676




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