Difference between revisions of "Aact"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/3NUCLE1 3NUCLE1] == * direction: ** REVERSIBLE * common name: ** 3 nucleotidase 3 AMP * Synonym...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TMDS TMDS] == * direction: ** LEFT-TO-RIGHT * common name: ** Thymidylate synthase * Synonym(s): =...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/TMDS TMDS] == |
* direction: | * direction: | ||
| − | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
| − | ** | + | ** Thymidylate synthase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[dump]][c] '''+''' 1.0 [[mlthf]][c] '''=>''' 1.0 [[dtmp]][c] '''+''' 1.0 [[dhf]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 DUMP C9H11N2O8P[c] '''+''' 1.0 5,10-Methylenetetrahydrofolate[c] '''=>''' 1.0 DTMP C10H13N2O8P[c] '''+''' 1.0 7,8-Dihydrofolate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[EF1576]] |
| + | ** [[pantograph]]-[[l_plantarum_wcfs1]] | ||
| + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | ||
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240] | ||
| + | ** '''82''' reactions found over '''244''' reactions in the full pathway | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map00670]]: [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670] | ||
| + | ** '''14''' reactions found over '''65''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12104 12104] |
| − | + | * MetaNetX (MNX) Equation : MNXR104889 | |
| − | * MetaNetX (MNX) Equation : | + | * KEGG Reaction : R02101 |
| − | * KEGG Reaction : | + | * EC Number : 2.1.1.45 |
| − | * EC Number : | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: direction= | + | {{#set: common name=Thymidylate synthase}} |
| − | {{#set: common name= | + | {{#set: gene associated=EF1576}} |
| − | {{#set: gene associated= | + | {{#set: in pathway=map00240|map01100|map00670}} |
| − | {{#set: in pathway=}} | + | |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Revision as of 18:42, 18 March 2018
Contents
Reaction TMDS
- direction:
- LEFT-TO-RIGHT
- common name:
- Thymidylate synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 DUMP C9H11N2O8P[c] + 1.0 5,10-Methylenetetrahydrofolate[c] => 1.0 DTMP C10H13N2O8P[c] + 1.0 7,8-Dihydrofolate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map00240: map00240
- 82 reactions found over 244 reactions in the full pathway
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map00670: map00670
- 14 reactions found over 65 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- RHEA:
- MetaNetX (MNX) Equation : MNXR104889
- KEGG Reaction : R02101
- EC Number : 2.1.1.45
