Difference between revisions of "Srb L"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ASPCT ASPCT] == * direction: ** LEFT-TO-RIGHT * common name: ** Aspartate carbamoyltransferase * Sy...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/KG6PDC KG6PDC] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-keto-L-gulonate 6-phosphate dec...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ASPCT ASPCT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/KG6PDC KG6PDC] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Aspartate carbamoyltransferase
+
** 3-keto-L-gulonate 6-phosphate decarboxylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[cbp]][c] '''+''' 1.0 [[asp__L]][c] '''=>''' 1.0 [[cbasp]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[3dhgulnp]][c] '''=>''' 1.0 [[xu5p__L]][c] '''+''' 1.0 [[co2]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Carbamoyl phosphate[c] '''+''' 1.0 L-Aspartate[c] '''=>''' 1.0 N-Carbamoyl-L-aspartate[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 H+[c]
+
** 1.0 H+[c] '''+''' 1.0 3-keto-L-gulonate-6-phosphate[c] '''=>''' 1.0 L-Xylulose 5-phosphate[c] '''+''' 1.0 CO2 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1719]]
+
* [[EF1129]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
−
** '''82''' reactions found over '''244''' reactions in the full pathway
 
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
+
* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
−
** '''22''' reactions found over '''93''' reactions in the full pathway
+
** '''15''' reactions found over '''54''' reactions in the full pathway
 +
* [[map00053]]: [http://www.genome.jp/dbget-bin/www_bget?map00053 map00053]
 +
** '''7''' reactions found over '''50''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20013 20013]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14353 14353]
−
* BioCyc : META:ASPCARBTRANS-RXN
+
* BioCyc : META:RXN0-705
−
* MetaNetX (MNX) Equation : MNXR96080
+
* MetaNetX (MNX) Equation : MNXR100935
−
* KEGG Reaction : R01397
+
* KEGG Reaction : R07125
−
* EC Number : 2.1.3.2
+
* EC Number : 4.1.1.85
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Aspartate carbamoyltransferase}}
+
{{#set: common name=3-keto-L-gulonate 6-phosphate decarboxylase}}
−
{{#set: gene associated=EF1719}}
+
{{#set: gene associated=EF1129}}
−
{{#set: in pathway=map00240|map01100|map00250}}
+
{{#set: in pathway=map01100|map00040|map00053|map01120}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Revision as of 18:42, 18 March 2018

Reaction KG6PDC

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-keto-L-gulonate 6-phosphate decarboxylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 3-keto-L-gulonate-6-phosphate[c] => 1.0 L-Xylulose 5-phosphate[c] + 1.0 CO2 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN0-705
  • MetaNetX (MNX) Equation : MNXR100935
  • KEGG Reaction : R07125
  • EC Number : 4.1.1.85




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