Difference between revisions of "GLUDy"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALDD3y ALDD3y] == * direction: ** LEFT-TO-RIGHT * common name: ** Aldehyde dehydrogenase (propanal,...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYO1 GLYO1] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycine oxidase * Synonym(s): == R...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALDD3y ALDD3y] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYO1 GLYO1] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Aldehyde dehydrogenase (propanal, NADP)
+
** Glycine oxidase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[nadp]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[ppal]][c] '''=>''' 1.0 [[ppa]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[nadph]][c]
+
** 1.0 [[gly]][c] '''+''' 1.0 [[o2]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[glx]][c] '''+''' 1.0 [[nh4]][c] '''+''' 1.0 [[h2o2]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Propanal[c] '''=>''' 1.0 Propionate (n-C3:0)[c] '''+''' 2.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c]
+
** 1.0 Glycine[c] '''+''' 1.0 O2 O2[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Glyoxylate[c] '''+''' 1.0 Ammonium[c] '''+''' 1.0 Hydrogen peroxide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[EF0253]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[gap-filling]]
** [[pantograph]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR95754
+
* EC Number : 1.4.3.19
 +
* BioCyc : META:1.4.3.19-RXN
 +
* MetaNetX (MNX) Equation : MNXR100352
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11532 11532]
 +
* Reactome : REACT_R-BTA-389821
 +
* KEGG Reaction : R00366
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Aldehyde dehydrogenase (propanal, NADP)}}
+
{{#set: common name=Glycine oxidase}}
{{#set: gene associated=EF0253}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
+
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}

Revision as of 18:44, 18 March 2018

Reaction GLYO1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycine oxidase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Glycine[c] + 1.0 O2 O2[c] + 1.0 H2O H2O[c] => 1.0 Glyoxylate[c] + 1.0 Ammonium[c] + 1.0 Hydrogen peroxide[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • EC Number : 1.4.3.19
  • BioCyc : META:1.4.3.19-RXN
  • MetaNetX (MNX) Equation : MNXR100352
  • RHEA:
  • Reactome : REACT_R-BTA-389821
  • KEGG Reaction : R00366