Difference between revisions of "SPMDAT1"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ADNUC ADNUC] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenosine hydrolase * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ETHAAL ETHAAL] == * direction: ** LEFT-TO-RIGHT * common name: ** Ethanolamine ammonia-lyase * Syno...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ADNUC ADNUC] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ETHAAL ETHAAL] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Adenosine hydrolase
+
** Ethanolamine ammonia-lyase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[adn]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[ade]][c] '''+''' 1.0 [[rib__D]][c]
+
** 1.0 [[etha]][c] '''=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[acald]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Adenosine[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Adenine[c] '''+''' 1.0 D-Ribose[c]
+
** 1.0 Ethanolamine[c] '''=>''' 1.0 Ammonium[c] '''+''' 1.0 Acetaldehyde[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1921]]
+
* [[EF1629]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
* [[EF1627]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
* [[EF2587]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00564]]: [http://www.genome.jp/dbget-bin/www_bget?map00564 map00564]
** '''460''' reactions found over '''2349''' reactions in the full pathway
+
** '''19''' reactions found over '''134''' reactions in the full pathway
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
+
** '''82''' reactions found over '''244''' reactions in the full pathway
+
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
** '''97''' reactions found over '''298''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
*** [[l_plantarum_wcfs1]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18669 18669]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15313 15313]
* BioCyc : META:ADENOSINE-NUCLEOSIDASE-RXN
+
* BioCyc : META:ETHAMLY-RXN
* MetaNetX (MNX) Equation : MNXR95459
+
* MetaNetX (MNX) Equation : MNXR97968
* KEGG Reaction : R01245
+
* KEGG Reaction : R00749
* EC Number : 3.2.2.1
+
* EC Number : 4.3.1.7
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Adenosine hydrolase}}
+
{{#set: common name=Ethanolamine ammonia-lyase}}
{{#set: gene associated=EF1921|EF2587}}
+
{{#set: gene associated=EF1629|EF1627}}
{{#set: in pathway=map01100|map00240|map00230}}
+
{{#set: in pathway=map00564}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
 

Revision as of 18:44, 18 March 2018

Reaction ETHAAL

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ethanolamine ammonia-lyase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Ethanolamine[c] => 1.0 Ammonium[c] + 1.0 Acetaldehyde[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:ETHAMLY-RXN
  • MetaNetX (MNX) Equation : MNXR97968
  • KEGG Reaction : R00749
  • EC Number : 4.3.1.7