Difference between revisions of "PUNP3"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TECA2S45 TECA2S45] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycerol teichoic acid n45...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPCDC PPCDC] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphopantothenoylcysteine decarbo...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/TECA2S45 TECA2S45] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPCDC PPCDC] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Glycerol teichoic acid  n45  unlinked  D ala substituted
+
** Phosphopantothenoylcysteine decarboxylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 45.0 [[cdpglyc]][c] '''+''' 45.0 [[ala__D]][c] '''+''' 1.0 [[uacgam]][c] '''+''' 45.0 [[atp]][c] '''+''' 1.0 [[uacmam]][c] '''+''' 45.0 [[h2o]][c] '''=>''' 45.0 [[ppi]][c] '''+''' 45.0 [[cmp]][c] '''+''' 1.0 [[udp]][c] '''+''' 1.0 [[ump]][c] '''+''' 45.0 [[amp]][c] '''+''' 91.0 [[h]][c] '''+''' 1.0 [[gtca2_45_BS]][c]
+
** 1.0 [[4ppcys]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[pan4p]][c]
 
* With common name(s):
 
* With common name(s):
−
** 45.0 CDPglycerol C12H19N3O13P2[c] '''+''' 45.0 D-Alanine[c] '''+''' 1.0 UDP-N-acetyl-D-glucosamine[c] '''+''' 45.0 ATP C10H12N5O13P3[c] '''+''' 1.0 UDP-N-acetyl-D-mannosamine[c] '''+''' 45.0 H2O H2O[c] '''=>''' 45.0 Diphosphate[c] '''+''' 45.0 CMP C9H12N3O8P[c] '''+''' 1.0 UDP C9H11N2O12P2[c] '''+''' 1.0 UMP C9H11N2O9P[c] '''+''' 45.0 AMP C10H12N5O7P[c] '''+''' 91.0 H+[c] '''+''' 1.0 Glycerol teichoic acid  n45  unlinked  D ala substituted C286H612N47O328P46[c]
+
** 1.0 N-((R)-4-Phosphopantothenoyl)-L-cysteine[c] '''+''' 1.0 H+[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 Pantetheine 4'-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2749]]
+
* [[EF2656]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
−
* [[EF2748]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF2747]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF2485]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF2746]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF1173]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF2493]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF2198]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF2486]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF1172]]
+
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
 +
** '''17''' reactions found over '''75''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR104770
+
* EC Number : 4.1.1.36
 +
* BioCyc : META:P-PANTOCYSDECARB-RXN
 +
* MetaNetX (MNX) Equation : MNXR103098
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16793 16793]
 +
* Reactome : REACT_R-ATH-196840
 +
* KEGG Reaction : R03269
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Glycerol teichoic acid  n45  unlinked  D ala substituted}}
+
{{#set: common name=Phosphopantothenoylcysteine decarboxylase}}
−
{{#set: gene associated=EF2749|EF2748|EF2747|EF2485|EF2746|EF1173|EF2493|EF2198|EF2486|EF1172}}
+
{{#set: gene associated=EF2656}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map00770}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 

Revision as of 18:46, 18 March 2018

Reaction PPCDC

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphopantothenoylcysteine decarboxylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 N-((R)-4-Phosphopantothenoyl)-L-cysteine[c] + 1.0 H+[c] => 1.0 CO2 CO2[c] + 1.0 Pantetheine 4'-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 4.1.1.36
  • BioCyc : META:P-PANTOCYSDECARB-RXN
  • MetaNetX (MNX) Equation : MNXR103098
  • RHEA:
  • Reactome : REACT_R-ATH-196840
  • KEGG Reaction : R03269




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