Difference between revisions of "ExchangeSeed so4"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UAG2EMA UAG2EMA] == * direction: ** REVERSIBLE * common name: ** UDP-N-acetyl-D-glucosamine 2-epime...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TDPGDH TDPGDH] == * direction: ** LEFT-TO-RIGHT * common name: ** DTDPglucose 4,6-dehydratase * Syn...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/UAG2EMA UAG2EMA] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/TDPGDH TDPGDH] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** UDP-N-acetyl-D-glucosamine 2-epimerase (Hydrolysis)
+
** DTDPglucose 4,6-dehydratase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[uacgam]][c] '''+''' 1.0 [[h2o]][c] '''<=>''' 1.0 [[udp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[acmana]][c]
+
** 1.0 [[dtdpglu]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[dtdp4d6dg]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 UDP-N-acetyl-D-glucosamine[c] '''+''' 1.0 H2O H2O[c] '''<=>''' 1.0 UDP C9H11N2O12P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 N-Acetyl-D-mannosamine[c]
+
** 1.0 DTDPglucose[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 DTDP-4-dehydro-6-deoxy-D-glucose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2917]]
+
* [[EF2192]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00521]]: [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521]
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
+
** '''7''' reactions found over '''14''' reactions in the full pathway
−
* [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520]
+
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
−
** '''24''' reactions found over '''80''' reactions in the full pathway
+
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00523]]: [http://www.genome.jp/dbget-bin/www_bget?map00523 map00523]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[map00525]]: [http://www.genome.jp/dbget-bin/www_bget?map00525 map00525]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[map01055]]: [http://www.genome.jp/dbget-bin/www_bget?map01055 map01055]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30683 30683]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17221 17221]
−
* Reactome : REACT_R-BTA-4085021
+
* BioCyc : META:DTDPGLUCDEHYDRAT-RXN
−
* MetaNetX (MNX) Equation : MNXR105025
+
* MetaNetX (MNX) Equation : MNXR104761
−
* KEGG Reaction : R00414
+
* KEGG Reaction : R06513
−
* EC Number : 3.2.1.183
+
* EC Number : 4.2.1.46
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=UDP-N-acetyl-D-glucosamine 2-epimerase (Hydrolysis)}}
+
{{#set: common name=DTDPglucose 4,6-dehydratase}}
−
{{#set: gene associated=EF2917}}
+
{{#set: gene associated=EF2192}}
−
{{#set: in pathway=map01100|map00520}}
+
{{#set: in pathway=map00521|map01130|map00523|map00525|map01055}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 

Revision as of 18:46, 18 March 2018

Reaction TDPGDH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • DTDPglucose 4,6-dehydratase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 DTDPglucose[c] => 1.0 H2O H2O[c] + 1.0 DTDP-4-dehydro-6-deoxy-D-glucose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:DTDPGLUCDEHYDRAT-RXN
  • MetaNetX (MNX) Equation : MNXR104761
  • KEGG Reaction : R06513
  • EC Number : 4.2.1.46




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