Difference between revisions of "GALKr"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GPDDA2 GPDDA2] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycerophosphodiester phosphodies...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_val__L TransportSeed_val__L] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == React...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/GPDDA2 GPDDA2] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_val__L TransportSeed_val__L] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine)
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[g3pe]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[glyc3p]][c] '''+''' 1.0 [[etha]][c]
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** 1.0 [[val__L]][e] '''=>''' 1.0 [[val__L]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Sn-Glycero-3-phosphoethanolamine[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Glycerol 3-phosphate[c] '''+''' 1.0 Ethanolamine[c]
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** 1.0 L-Valine[e] '''=>''' 1.0 L-Valine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[EF2163]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
* [[EF0779]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map00564]]: [http://www.genome.jp/dbget-bin/www_bget?map00564 map00564]
 
** '''19''' reactions found over '''134''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[manual]]
** [[pantograph]]:
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** Source: [[manual-import_from_medium]]
*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[added to manage seeds from extracellular to cytosol compartment]]
*** [[l_plantarum_wcfs1]]
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== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29319 29319]
 
* BioCyc : META:RXN-14160
 
* MetaNetX (MNX) Equation : MNXR100411
 
* KEGG Reaction : R01470
 
* EC Number : 3.1.4.2
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine)}}
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{{#set: in pathway=}}
{{#set: gene associated=EF2163|EF0779}}
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{{#set: reconstruction category=manual}}
{{#set: in pathway=map00564}}
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{{#set: reconstruction source=manual-import_from_medium}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
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Revision as of 18:46, 18 March 2018

Reaction TransportSeed_val__L

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Valine[e] => 1.0 L-Valine[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links