Difference between revisions of "SPMDt3"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HMPK1 HMPK1] == * direction: ** LEFT-TO-RIGHT * common name: ** Hydroxymethylpyrimidine kinase (ATP...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLCNt2ir GLCNt2ir] == * direction: ** REVERSIBLE * common name: ** D gluconate transport via proton...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/HMPK1 HMPK1] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLCNt2ir GLCNt2ir] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Hydroxymethylpyrimidine kinase (ATP)
+
** D gluconate transport via proton symport
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[4ahmmp]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[4ampm]][c]
+
** 1.0 [[glcn__D]][e] '''+''' 1.0 [[h]][e] '''<=>''' 1.0 [[glcn__D]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 4-Amino-5-hydroxymethyl-2-methylpyrimidine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 4-Amino-2-methyl-5-phosphomethylpyrimidine[c]
+
** 1.0 D Gluconate C6H11O7[e] '''+''' 1.0 H+[e] '''<=>''' 1.0 D Gluconate C6H11O7[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0202]]
+
* [[EF2647]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF2775]]
+
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00730]]: [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730]
 
−
** '''11''' reactions found over '''24''' reactions in the full pathway
 
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23096 23096]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28831 28831]
−
* BioCyc : META:OHMETPYRKIN-RXN
+
* MetaNetX (MNX) Equation : MNXR100209
−
* MetaNetX (MNX) Equation : MNXR100664
+
* BioCyc : META:TRANS-RXN0-209
−
* KEGG Reaction : R03471
+
{{#set: direction=REVERSIBLE}}
−
* EC Number : 2.7.1.49
+
{{#set: common name=D gluconate transport via proton symport}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: gene associated=EF2647}}
−
{{#set: common name=Hydroxymethylpyrimidine kinase (ATP)}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=EF0202|EF2775}}
+
−
{{#set: in pathway=map00730|map01100}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Revision as of 18:46, 18 March 2018

Reaction GLCNt2ir

  • direction:
    • REVERSIBLE
  • common name:
    • D gluconate transport via proton symport
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D Gluconate C6H11O7[e] + 1.0 H+[e] <=> 1.0 D Gluconate C6H11O7[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR100209
  • BioCyc : META:TRANS-RXN0-209




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