Difference between revisions of "DAPE"

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(Created page with "Category:Gene == Gene EF0264 == * Synonym(s): == Reactions associated == * GUAPRT ** pantograph-l_plantarum_wcfs1 ** pantograph-e_coli_sstr_k12_substr_m...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DAPE DAPE] == * direction: ** REVERSIBLE * common name: ** Diaminopimelate epimerase * Synonym(s):...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene EF0264 ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/DAPE DAPE] ==
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* direction:
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** REVERSIBLE
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* common name:
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** Diaminopimelate epimerase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[GUAPRT]]
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* With identifiers:
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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** 1.0 [[26dap_LL]][c] '''<=>''' 1.0 [[26dap__M]][c]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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* With common name(s):
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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** 1.0 LL-2,6-Diaminoheptanedioate[c] '''<=>''' 1.0 Meso-2,6-Diaminoheptanedioate[c]
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* [[HXPRT]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* Gene: [[EF0464]]
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== Pathways associated ==
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** Source: [[orthology-l_plantarum_wcfs1]]
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* [[map01100]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[map01110]]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[map00983]]
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== Pathways  ==
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* [[map00230]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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** '''179''' reactions found over '''1054''' reactions in the full pathway
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* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
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** '''13''' reactions found over '''34''' reactions in the full pathway
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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** '''104''' reactions found over '''715''' reactions in the full pathway
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* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
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** '''56''' reactions found over '''228''' reactions in the full pathway
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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** '''135''' reactions found over '''694''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: reaction associated=GUAPRT|HXPRT}}
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* RHEA:
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{{#set: pathway associated=map01100|map01110|map00983|map00230}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15393 15393]
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* BioCyc : META:DIAMINOPIMEPIM-RXN
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* MetaNetX (MNX) Equation : MNXR97143
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* KEGG Reaction : R02735
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* EC Number : 5.1.1.7
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Diaminopimelate epimerase}}
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{{#set: gene associated=EF0464}}
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{{#set: in pathway=map01100|map01110|map00300|map01120|map01230|map01130}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:07, 21 March 2018

Reaction DAPE

  • direction:
    • REVERSIBLE
  • common name:
    • Diaminopimelate epimerase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 LL-2,6-Diaminoheptanedioate[c] <=> 1.0 Meso-2,6-Diaminoheptanedioate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:DIAMINOPIMEPIM-RXN
  • MetaNetX (MNX) Equation : MNXR97143
  • KEGG Reaction : R02735
  • EC Number : 5.1.1.7




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