Difference between revisions of "URIH"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene EF0284 == * Synonym(s): == Reactions associated == * 3HAD100 ** pantograph-l_plantarum_wcfs1 ** pantograph-e_coli_sstr_k12_substr_...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/URIH URIH] == * direction: ** LEFT-TO-RIGHT * common name: ** Uridine hydrolase * Synonym(s): == R...")
 
Line 1: Line 1:
[[Category:Gene]]
+
[[Category:Reaction]]
== Gene EF0284 ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/URIH URIH] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 +
* common name:
 +
** Uridine hydrolase
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
+
== Reaction Formula ==
* [[3HAD100]]
+
* With identifiers:
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** 1.0 [[uri]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[rib__D]][c] '''+''' 1.0 [[ura]][c]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* With common name(s):
* [[3HAD120]]
+
** 1.0 Uridine[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 D-Ribose[c] '''+''' 1.0 Uracil[c]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
== Genes associated with this reaction  ==
* [[3HAD121]]
+
Genes have been associated with this reaction based on different elements listed below.
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* Gene: [[EF1921]]
* [[3HAD140]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
== Pathways  ==
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
* [[3HAD141]]
+
** '''82''' reactions found over '''244''' reactions in the full pathway
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
* [[3HAD160]]
+
** '''19''' reactions found over '''97''' reactions in the full pathway
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
== Reconstruction information  ==
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* Category: [[orthology]]
* [[3HAD161]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
* [[3HAD180]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* [[3HAD181]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* [[3HAD40]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* [[3HAD60]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* [[3HAD80]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* [[HBUHL1_manual]]
+
** 4_newreactions
+
* [[HHYHL2_manual]]
+
** 4_newreactions
+
* [[OGMEACPD]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* [[OPMEACPD]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
== Pathways associated ==
+
* [[map01100]]
+
* [[map00780]]
+
* [[map01212]]
+
* [[map00061]]
+
 
== External links  ==
 
== External links  ==
{{#set: reaction associated=3HAD100|3HAD120|3HAD121|3HAD140|3HAD141|3HAD160|3HAD161|3HAD180|3HAD181|3HAD40|3HAD60|3HAD80|HBUHL1_manual|HHYHL2_manual|OGMEACPD|OPMEACPD}}
+
* RHEA:
{{#set: pathway associated=map01100|map00780|map01212|map00061}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15577 15577]
 +
* BioCyc : META:URIDINE-NUCLEOSIDASE-RXN
 +
* MetaNetX (MNX) Equation : MNXR105161
 +
* KEGG Reaction : R01080
 +
* EC Number : 3.2.2.3
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Uridine hydrolase}}
 +
{{#set: gene associated=EF1921}}
 +
{{#set: in pathway=map00240|map00760}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:08, 21 March 2018

Reaction URIH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Uridine hydrolase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Uridine[c] + 1.0 H2O H2O[c] => 1.0 D-Ribose[c] + 1.0 Uracil[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:URIDINE-NUCLEOSIDASE-RXN
  • MetaNetX (MNX) Equation : MNXR105161
  • KEGG Reaction : R01080
  • EC Number : 3.2.2.3