Difference between revisions of "Glyald"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/VALt2r VALt2r] == * direction: ** REVERSIBLE * common name: ** L valine reversible transport via pr...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACONTa ACONTa] == * direction: ** REVERSIBLE * common name: ** Aconitase (half-reaction A, Citrate...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/VALt2r VALt2r] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACONTa ACONTa] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** L valine reversible transport via proton symport
+
** Aconitase (half-reaction A, Citrate hydro-lyase)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[val__L]][e] '''+''' 1.0 [[h]][e] '''<=>''' 1.0 [[val__L]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[cit]][c] '''<=>''' 1.0 [[acon_C]][c] '''+''' 1.0 [[h2o]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 L-Valine[e] '''+''' 1.0 H+[e] '''<=>''' 1.0 L-Valine[c] '''+''' 1.0 H+[c]
+
** 1.0 Citrate[c] '''<=>''' 1.0 Cis-Aconitate[c] '''+''' 1.0 H2O H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF0243]]
 
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
 +
** '''21''' reactions found over '''129''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
 +
** '''14''' reactions found over '''80''' reactions in the full pathway
 +
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
 +
** '''14''' reactions found over '''157''' reactions in the full pathway
 +
* [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020]
 +
** '''4''' reactions found over '''70''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* [[gap-filling]]:
−
** [[pantograph]]:
+
** [[meneco]]:
−
*** [[l_plantarum_wcfs1]]
+
*** [[added for gapfilling]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR105188
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10228 10228]
 +
* EC Number : 4.2.1.3
 +
* MetaNetX (MNX) Equation : MNXR95386
 +
* KEGG Reaction : R01325
 +
* BioCyc : META:ACONITATEDEHYDR-RXN
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=L valine reversible transport via proton symport}}
+
{{#set: common name=Aconitase (half-reaction A, Citrate hydro-lyase)}}
−
{{#set: gene associated=EF0243}}
+
{{#set: in pathway=map01100|map00630|map01110|map01120|map01210|map00720|map00020|map01130}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=added for gapfilling}}
−
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+

Revision as of 15:42, 10 January 2018

Reaction ACONTa

  • direction:
    • REVERSIBLE
  • common name:
    • Aconitase (half-reaction A, Citrate hydro-lyase)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Citrate[c] <=> 1.0 Cis-Aconitate[c] + 1.0 H2O H2O[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 4.2.1.3
  • MetaNetX (MNX) Equation : MNXR95386
  • KEGG Reaction : R01325
  • BioCyc : META:ACONITATEDEHYDR-RXN




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