Difference between revisions of "UAMAS"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/trnagly trnagly] == * common name: ** TRNA(Gly) * Synonym(s): == Reaction(s) known to consum...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UAMAS UAMAS] == * direction: ** LEFT-TO-RIGHT * common name: ** UDP-N-acetylmuramoyl-L-alanine synt...")
 
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/trnagly trnagly] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/UAMAS UAMAS] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** TRNA(Gly)
+
** UDP-N-acetylmuramoyl-L-alanine synthetase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
* [[GLYTRS]]
+
* With identifiers:
== Reaction(s) known to produce the compound ==
+
** 1.0 [[uamr]][c] '''+''' 1.0 [[ala__L]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[uama]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[pi]][c]
* [[PROTS_LPL_v60]]
+
* With common name(s):
== Reaction(s) of unknown directionality ==
+
** 1.0 UDP-N-acetylmuramate[c] '''+''' 1.0 L-Alanine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 UDP-N-acetylmuramoyl-L-alanine[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 Phosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF1908]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00471]]: [http://www.genome.jp/dbget-bin/www_bget?map00471 map00471]
 +
** '''4''' reactions found over '''10''' reactions in the full pathway
 +
* [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550]
 +
** '''10''' reactions found over '''27''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: common name=TRNA(Gly)}}
+
* RHEA:
{{#set: consumed by=GLYTRS}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23372 23372]
{{#set: produced by=PROTS_LPL_v60}}
+
* BioCyc : META:UDP-NACMUR-ALA-LIG-RXN
 +
* MetaNetX (MNX) Equation : MNXR105039
 +
* KEGG Reaction : R03193
 +
* EC Number : 6.3.2.8
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=UDP-N-acetylmuramoyl-L-alanine synthetase}}
 +
{{#set: gene associated=EF1908}}
 +
{{#set: in pathway=map01100|map00471|map00550}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:16, 21 March 2018

Reaction UAMAS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • UDP-N-acetylmuramoyl-L-alanine synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 UDP-N-acetylmuramate[c] + 1.0 L-Alanine[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 UDP-N-acetylmuramoyl-L-alanine[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:UDP-NACMUR-ALA-LIG-RXN
  • MetaNetX (MNX) Equation : MNXR105039
  • KEGG Reaction : R03193
  • EC Number : 6.3.2.8