Difference between revisions of "DKI"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00790 map00790] == * common_name: ** Folate biosynthesis * Synonym(s): == Reaction(s) found == ''...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DKI DKI] == * direction: ** REVERSIBLE * common name: ** 5 Dehydro 4 deoxy D glucuronate ketol isom...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00790 map00790] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/DKI DKI] ==
* common_name:
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* direction:
** Folate biosynthesis
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** REVERSIBLE
 +
* common name:
 +
** 5 Dehydro 4 deoxy D glucuronate ketol isomerase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''12''' reactions found over '''41''' reactions in the full pathway
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* With identifiers:
* [[AKP1]]
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** 1.0 [[5dh4dglcn]][c] '''<=>''' 1.0 [[46dh25dohxn]][c]
** 1 associated gene(s):
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* With common name(s):
*** [[EF2973]]
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** 1.0 5 Dehydro 4 deoxy D glucuronate C6H7O6[c] '''<=>''' 1.0  4S  4 6 Dihydroxy 2 5 dioxohexanoate C6H7O6[c]
** 1 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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== Genes associated with this reaction  ==
* [[CPMPS]]
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Genes have been associated with this reaction based on different elements listed below.
** 2 associated gene(s):
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* Gene: [[EF2264]]
*** [[EF1393]]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
*** [[EF1392]]
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* Gene: [[EF0425]]
** 1 reconstruction source(s) associated:
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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== Pathways  ==
* [[DHFR]]
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== Reconstruction information  ==
** 1 associated gene(s):
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* Category: [[orthology]]
*** [[EF1577]]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
** 3 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[DHFS]]
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** 1 associated gene(s):
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*** [[EF2928]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[DHNPA2r]]
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** 1 associated gene(s):
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*** [[EF3269]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[DHPS2]]
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** 1 associated gene(s):
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*** [[EF3265]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[DHPTDNR]]
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** 2 associated gene(s):
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*** [[EF0404]]
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*** [[EF0648]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[DHPTDNRN]]
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** 2 associated gene(s):
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*** [[EF0404]]
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*** [[EF0648]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[DNTPPA_1]]
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** 1 associated gene(s):
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*** [[EF3266]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-l_plantarum_wcfs1]]
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* [[GTPCI]]
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** 1 associated gene(s):
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*** [[EF3267]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[HPPK2]]
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** 1 associated gene(s):
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*** [[EF3268]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[THFGLUS]]
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** 1 associated gene(s):
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*** [[EF2928]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-l_plantarum_wcfs1]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/10FTHFGLULL 10FTHFGLULL]
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* [http://bigg.ucsd.edu/universal/reactions/10FTHFGLULLm 10FTHFGLULLm]
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* [http://bigg.ucsd.edu/universal/reactions/ADCL ADCL]
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* [http://bigg.ucsd.edu/universal/reactions/ADCS ADCS]
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* [http://bigg.ucsd.edu/universal/reactions/AKP1_1 AKP1_1]
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* [http://bigg.ucsd.edu/universal/reactions/CDGR CDGR]
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* [http://bigg.ucsd.edu/universal/reactions/CPH4S CPH4S]
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* [http://bigg.ucsd.edu/universal/reactions/DHFOR DHFOR]
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* [http://bigg.ucsd.edu/universal/reactions/DHFR2i DHFR2i]
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* [http://bigg.ucsd.edu/universal/reactions/DHFRim DHFRim]
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* [http://bigg.ucsd.edu/universal/reactions/DHFS_1 DHFS_1]
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* [http://bigg.ucsd.edu/universal/reactions/DHPR DHPR]
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* [http://bigg.ucsd.edu/universal/reactions/DHPS2_1 DHPS2_1]
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* [http://bigg.ucsd.edu/universal/reactions/DNMPPA DNMPPA]
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* [http://bigg.ucsd.edu/universal/reactions/DNTPPA DNTPPA]
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* [http://bigg.ucsd.edu/universal/reactions/FOLR2 FOLR2]
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* [http://bigg.ucsd.edu/universal/reactions/FOLR2_1 FOLR2_1]
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* [http://bigg.ucsd.edu/universal/reactions/FPGS_tm FPGS_tm]
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* [http://bigg.ucsd.edu/universal/reactions/GTPCI_1 GTPCI_1]
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* [http://bigg.ucsd.edu/universal/reactions/GTPCI_2 GTPCI_2]
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* [http://bigg.ucsd.edu/universal/reactions/GTPCIn GTPCIn]
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* [http://bigg.ucsd.edu/universal/reactions/H4MPTGL_atp H4MPTGL_atp]
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* [http://bigg.ucsd.edu/universal/reactions/PTHPS PTHPS]
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* [http://bigg.ucsd.edu/universal/reactions/PTHPSn PTHPSn]
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* [http://bigg.ucsd.edu/universal/reactions/SPR SPR]
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* [http://bigg.ucsd.edu/universal/reactions/SPRn SPRn]
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* [http://bigg.ucsd.edu/universal/reactions/THFGLUS_1 THFGLUS_1]
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* [http://bigg.ucsd.edu/universal/reactions/THFOR1 THFOR1]
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* [http://bigg.ucsd.edu/universal/reactions/THFOR2 THFOR2]
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== External links  ==
 
== External links  ==
{{#set: common_name=Folate biosynthesis}}
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* MetaNetX (MNX) Equation : MNXR97492
{{#set: reaction found=12}}
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{{#set: direction=REVERSIBLE}}
{{#set: total reaction=41}}
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{{#set: common name=5 Dehydro 4 deoxy D glucuronate ketol isomerase}}
{{#set: completion rate=29.0}}
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{{#set: gene associated=EF2264|EF0425}}
 +
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:24, 21 March 2018

Reaction DKI

  • direction:
    • REVERSIBLE
  • common name:
    • 5 Dehydro 4 deoxy D glucuronate ketol isomerase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 5 Dehydro 4 deoxy D glucuronate C6H7O6[c] <=> 1.0 4S 4 6 Dihydroxy 2 5 dioxohexanoate C6H7O6[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR97492