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Line 1: |
| − | [[Category:Pathway]] | + | [[Category:Metabolite]] |
| − | == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550] == | + | == Metabolite [http://bigg.ucsd.edu/universal/metabolites/gly gly] == |
| − | * common_name: | + | * common name: |
| − | ** Peptidoglycan biosynthesis | + | ** Glycine |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction(s) found == | + | == Reaction(s) known to consume the compound == |
| − | '''10''' reactions found over '''27''' reactions in the full pathway
| + | * [[GLYTRS]] |
| − | * [[ALAALAr]] | + | * [[TransportSeed_gly]] |
| − | ** 1 associated gene(s):
| + | * [[GLYt2pp_copy1]] |
| − | *** [[EF0843]]
| + | * [[GTHS]] |
| − | ** 2 reconstruction source(s) associated:
| + | * [[GLYO1]] |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | == Reaction(s) known to produce the compound == |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | * [[TransportSeed_gly]] |
| − | * [[PAPPT3]] | + | * [[ALDD31_1]] |
| − | ** 1 associated gene(s):
| + | * [[GLYt2pp_copy1]] |
| − | *** [[EF0992]]
| + | * [[THRAi]] |
| − | ** 2 reconstruction source(s) associated:
| + | * [[THRA2i]] |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | == Reaction(s) of unknown directionality == |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | * [[GHMT2r]] |
| − | * [[UAAGDS]] | + | * [[GLYTA]] |
| − | ** 1 associated gene(s):
| + | * [[ExchangeSeed_gly]] |
| − | *** [[EF0668]]
| + | * [[AGTi]] |
| − | ** 3 reconstruction source(s) associated:
| + | * [[GLYAMDTRc]] |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | * [[PRAGSr]] |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | * [[GLYDHDA]] |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[UAAGLS1]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF2585]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[UAGCVT]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[EF1169]]
| + | |
| − | *** [[EF2605]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[UAGPT3]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF0994]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | * [[UAMAGS]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF0993]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[UAMAS]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF1908]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[UAPGR]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[EF2733]]
| + | |
| − | *** [[EF2489]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[UGMDDS]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF0845]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | == Reaction(s) not found == | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDDCP1ex MDDCP1ex] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDDCP1pp MDDCP1pp]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDDCP2ex MDDCP2ex]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDDCP2pp MDDCP2pp] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDDCP3ex MDDCP3ex]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDDCP3pp MDDCP3pp]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDDCP4ex MDDCP4ex] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDDCP4pp MDDCP4pp]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDDCP5ex MDDCP5ex]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/MDDCP5pp MDDCP5pp] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PAPPT1 PAPPT1]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PAPPT2 PAPPT2]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/UAAGLS2 UAAGLS2] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/UAGPT1 UAGPT1]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/UAGPT2 UAGPT2] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/UGLDDS1 UGLDDS1] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/UGLDDS2 UGLDDS2]
| + | |
| | == External links == | | == External links == |
| − | {{#set: common_name=Peptidoglycan biosynthesis}} | + | {{#set: common name=Glycine}} |
| − | {{#set: reaction found=10}} | + | {{#set: consumed by=GLYTRS|TransportSeed_gly|GLYt2pp_copy1|GTHS|GLYO1}} |
| − | {{#set: total reaction=27}} | + | {{#set: produced by=TransportSeed_gly|ALDD31_1|GLYt2pp_copy1|THRAi|THRA2i}} |
| − | {{#set: completion rate=37.0}} | + | {{#set: reversible reaction associated=GHMT2r|GLYTA|ExchangeSeed_gly|AGTi|GLYAMDTRc|PRAGSr|GLYDHDA}} |
