Difference between revisions of "ICYSDS"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00660 map00660] == * common_name: ** C5-Branched dibasic acid metabolism * Synonym(s): == Reaction...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ICYSDS ICYSDS] == * direction: ** LEFT-TO-RIGHT * common name: ** ISC Cysteine desulfuration * Syno...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00660 map00660] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ICYSDS ICYSDS] ==
* common_name:
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* direction:
** C5-Branched dibasic acid metabolism
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** LEFT-TO-RIGHT
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* common name:
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** ISC Cysteine desulfuration
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''3''' reactions found over '''21''' reactions in the full pathway
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* With identifiers:
* [[ACHBS]]
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** 1.0 [[iscs]][c] '''+''' 1.0 [[cys__L]][c] '''=>''' 1.0 [[iscssh]][c] '''+''' 1.0 [[ala__L]][c]
** 1 associated gene(s):
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* With common name(s):
*** [[EF1213]]
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** 1.0 IscS sulfur acceptor protein[c] '''+''' 1.0 L-Cysteine[c] '''=>''' 1.0 IscS with bound sulfur[c] '''+''' 1.0 L-Alanine[c]
** 2 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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== Genes associated with this reaction  ==
*** [[orthology-l_plantarum_wcfs1]]
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Genes have been associated with this reaction based on different elements listed below.
* [[ACLDC]]
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* Gene: [[EF2072]]
** 1 associated gene(s):
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[EF1214]]
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* Gene: [[EF0371]]
** 2 reconstruction source(s) associated:
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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== Pathways  ==
*** [[orthology-l_plantarum_wcfs1]]
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== Reconstruction information  ==
* [[ACLS]]
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* Category: [[orthology]]
** 1 associated gene(s):
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[EF1213]]
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*** Tool: [[pantograph]]
** 2 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/ACAS_2ahbut ACAS_2ahbut]
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* [http://bigg.ucsd.edu/universal/reactions/ACHBSm ACHBSm]
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* [http://bigg.ucsd.edu/universal/reactions/ACLSm ACLSm]
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* [http://bigg.ucsd.edu/universal/reactions/APLh APLh]
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* [http://bigg.ucsd.edu/universal/reactions/APLm APLm]
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* [http://bigg.ucsd.edu/universal/reactions/CITCIb CITCIb]
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* [http://bigg.ucsd.edu/universal/reactions/CITMCOAHm CITMCOAHm]
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* [http://bigg.ucsd.edu/universal/reactions/CITMCOALm CITMCOALm]
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* [http://bigg.ucsd.edu/universal/reactions/IPMD IPMD]
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* [http://bigg.ucsd.edu/universal/reactions/ITCOALm ITCOALm]
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* [http://bigg.ucsd.edu/universal/reactions/MOSDC MOSDC]
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* [http://bigg.ucsd.edu/universal/reactions/OCAALD OCAALD]
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* [http://bigg.ucsd.edu/universal/reactions/OMCDC OMCDC]
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* [http://bigg.ucsd.edu/universal/reactions/OMCDCm OMCDCm]
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* [http://bigg.ucsd.edu/universal/reactions/PPATDh PPATDh]
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* [http://bigg.ucsd.edu/universal/reactions/SUCLm SUCLm]
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* [http://bigg.ucsd.edu/universal/reactions/SUCOAS SUCOAS]
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* [http://bigg.ucsd.edu/universal/reactions/SUCOASm SUCOASm]
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== External links  ==
 
== External links  ==
{{#set: common_name=C5-Branched dibasic acid metabolism}}
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* MetaNetX (MNX) Equation : MNXR100790
{{#set: reaction found=3}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: total reaction=21}}
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{{#set: common name=ISC Cysteine desulfuration}}
{{#set: completion rate=14.0}}
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{{#set: gene associated=EF2072|EF0371}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:25, 21 March 2018

Reaction ICYSDS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ISC Cysteine desulfuration
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 IscS sulfur acceptor protein[c] + 1.0 L-Cysteine[c] => 1.0 IscS with bound sulfur[c] + 1.0 L-Alanine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR100790