Difference between revisions of "FOMETRi"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/23CN2P3 23CN2P3] == * direction: ** REVERSIBLE * common name: ** 2 3 cyclic nucleotide 2 phospho...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACKr ACKr] == * direction: ** REVERSIBLE * common name: ** Acetate kinase * Synonym(s): == Reactio...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/23CN2P3 23CN2P3] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACKr ACKr] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** 2  3  cyclic nucleotide 2  phosphodiesterase  2  3  cyclic CMP
+
** Acetate kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h2o]][c] '''+''' 1.0 [[23ccmp]][c] '''<=>''' 1.0 [[3cmp]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[ac]][c] '''<=>''' 1.0 [[actp]][c] '''+''' 1.0 [[adp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O H2O[c] '''+''' 1.0 2',3'-Cyclic CMP[c] '''<=>''' 1.0 3  CMP C9H12N3O8P[c] '''+''' 1.0 H+[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Acetate[c] '''<=>''' 1.0 Acetyl phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0062]]
+
* [[EF1983]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''45''' reactions found over '''220''' reactions in the full pathway
 +
* [[map00640]]: [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640]
 +
** '''15''' reactions found over '''143''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 +
* [[map00430]]: [http://www.genome.jp/dbget-bin/www_bget?map00430 map00430]
 +
** '''5''' reactions found over '''24''' reactions in the full pathway
 +
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
 +
** '''14''' reactions found over '''157''' reactions in the full pathway
 +
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
 +
** '''31''' reactions found over '''163''' reactions in the full pathway
 +
* [[map00680]]: [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680]
 +
** '''18''' reactions found over '''75''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 +
*** [[e_coli_sstr_k12_substr_mg1655]]
 +
*** [[l_plantarum_wcfs1]]
 
*** [[b_subtilis_subsp_subtilis_str168]]
 
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27882 27882]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11352 11352]
−
* BioCyc : META:RXN-14112
+
* BioCyc : META:ACETATEKIN-RXN
−
* MetaNetX (MNX) Equation : MNXR94724
+
* MetaNetX (MNX) Equation : MNXR95269
−
* KEGG Reaction : R03929
+
* KEGG Reaction : R00315
−
* EC Number : 3.1.4.16
+
* EC Number : 2.7.2.1
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=2  3  cyclic nucleotide 2  phosphodiesterase  2  3  cyclic CMP }}
+
{{#set: common name=Acetate kinase}}
−
{{#set: gene associated=EF0062}}
+
{{#set: gene associated=EF1983}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map01200|map00640|map01120|map00430|map00720|map00620|map00680}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 15:45, 10 January 2018

Reaction ACKr

  • direction:
    • REVERSIBLE
  • common name:
    • Acetate kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 Acetate[c] <=> 1.0 Acetyl phosphate[c] + 1.0 ADP C10H12N5O10P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:ACETATEKIN-RXN
  • MetaNetX (MNX) Equation : MNXR95269
  • KEGG Reaction : R00315
  • EC Number : 2.7.2.1




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